Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02853 ATGTCACAAGGTTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATCAGTACCCAACTCATCGAAATTGAATCGCGCCCTCACATTACCCTATTTTCCAGCCCTTTCCTCGAACCCACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCGAAACAGGAACCTCTGCCTTTGTCCTTAGCGTCAATTGGCAGCCTTCCCAATGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCTCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAACTGGAGAGGAATATCGCCTTGGCTCCTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTATCCGGGTATGCAATTGATATTGGGTTGGTCGAATTTTCCCCTGTTCGAGAGCTCTTCTCTTTTGTTCTTGGCAACACTCTCGAAGCTTGA 552 47.1 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLASIGSLPNDNNILFLGPAPSISLLQFQSQLCEAMRKEGIETGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTLEA 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20349402 20349953 + CmoCh04G028530.1 Cmo04g02853 381828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02853 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Cmo04g02853 183 PANTHER - 1 182 - -
Cmo04g02853 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Cmo04g02853 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02853 Cmo15g00332 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02853 Cmo-Chr4:20349402 Cmo15g00332 Cmo-Chr15:1540074 1.69E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02853 - - csv:101208638 351.288