Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02854 ATGGCTCCCACCTCTCTTGTGGTTACAATCGAGAAGAACTTAATGGAAATCAATGGCTCTGATTCTTTGTTGCTTCCCGAGAAGCAGAAGGCTGCCAGTCCCAAGCAACTCACCTGGGTTCTTCTCCTCAAAGCTCACAGAGCTCTGTTTTTCTTCTCGTGGTTCGCCATCACTGTCAAGACTCTGTTTGCTTCTGTTAAGAAGCGCATTGCTCATGCGGATGTTAACGAAGAGGGTTCCAAGAGCCGAGGGAAGTTGTATAGGTTCATTAAAGCTTTTCTCGCTATTTCTATTGCGGGTTTGATTGTTGAACTTGTTGCCCATTTCAAGAAATGGAATCTGCGAATGATTCACCCATTGGAGCTCGAGGTTCATGGGCTTCTCCAATGGTTTTATGTCTCCTGGCTTTCGTTTCGAGTTGATTACATTGCTCCATTGGTGTTAATGCTTTCTAAATTCTGCATTGTTCTGTTCATGATCCAATCTCTTGATCGCCTTGTTCTCTGTGTTGGCTGCTTTTGGATCAAATTCAAGAAAATCAAACCCATCATTCAAGATGACGCTTATGATTTGGAAGATGCTTCAACTTTTCCGATGGTTCTAGTTCAAATCCCAATGTGCAATGAGAGAGAGGTTTATGCACAATCAATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATGAAAAGGGTGTTAATATTGTTTATAGACATAGATTGATCCGAACTGGGTATAAAGCTGGGAATCTCAAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTGGATGCTGATTTCCAGCCCAACCCTGATTTCCTTAAACTCACTGTCCCCCATTTCAAGGGAAATCCTCAGCTCGGTCTCGTCCAAGCTCGGTGGGCGTTCGTTAACCGGGACGAAAACTTACTTACACGACTCCAAAACATCAACTTGTGCTTCCATTTTGAAGTGGAGCAGCAAGTTAATGGGGCATTCCTGAACTTCTTTGGATTCAATGGAACGGCGGGCGTTTGGAGAACGGAAGCGCTTGAGGAATCTGGTGGCTGGCTCGAGAGGACGACGGTGGAAGATATGGATATTGCAGTTCGAGCTCACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTGTGTGAGTTGCCTGAATCATATGAAGCTTACAAGAAGCAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCCATCATTACTTCAAAGATATCAATATGGAAGAAGACGAACTTGATATTCCTGTTCTTTCTCCTGAGAAAGCTCATACTTCCCTTTTACTCATTCACTTTGTTTTGTGTCATACTTCCATTGACAATGTTCATTCCAGAAGCAGAATTGCCTCTCTGGGTAATCTGCTACATCCCAGTCTTCATGTCATTGCTAAACATTCTTCCATCCCCTAAATCCTTCCCTTTCTTGATCCCATACCTCTTGTTTGAGAACACCATGTCTGTCACAAAGTTCAACGCCATGGTTTCGGGGCTATTCCAGCTTGGAAGTTCATACGAATGGATTGTGACTAAAAAGACAGGACGATCATCCGAATCCGACTTCCTGGCATTTGCCGAGCGCGAGTCTAAAACTACAAACGAGGAGAAGATTCTGAGGAGACATTCGGAGTCAGGGCTCCAGTTGTTGAGTAAATTGAACCAACAAGAGAAGCAAATGGGTTCAAAGAAAAAGAGAAACAAGGTGTATAGAAAAGAACTGGCTCTTGCTTTTCTGCTGCTAACTGCATCAGCTAGAAGCTTGTTGTCAGCACATGGAGTTCACTTCTATTTCTTGCTATTCCAAGGTTTGTCATTCCTGGTGGTGGGTTTTGACTTGATTGGTGAGCAAATGAACTGA 1989 43.44 MAPTSLVVTIEKNLMEINGSDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWFAITVKTLFASVKKRIAHADVNEEGSKSRGKLYRFIKAFLAISIAGLIVELVAHFKKWNLRMIHPLELEVHGLLQWFYVSWLSFRVDYIAPLVLMLSKFCIVLFMIQSLDRLVLCVGCFWIKFKKIKPIIQDDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLTVPHFKGNPQLGLVQARWAFVNRDENLLTRLQNINLCFHFEVEQQVNGAFLNFFGFNGTAGVWRTEALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCVILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKTGRSSESDFLAFAERESKTTNEEKILRRHSESGLQLLSKLNQQEKQMGSKKKRNKVYRKELALAFLLLTASARSLLSAHGVHFYFLLFQGLSFLVVGFDLIGEQMN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20351480 20354090 - CmoCh04G028540.1 Cmo04g02854 381829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02854 662 SUPERFAMILY Nucleotide-diphospho-sugar transferases 200 499 IPR029044 -
Cmo04g02854 662 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 13 661 - -
Cmo04g02854 662 Coils Coil 596 616 - -
Cmo04g02854 662 Pfam Glycosyl transferase family group 2 292 498 IPR001173 -
Cmo04g02854 662 PANTHER - 13 661 - -
Cmo04g02854 662 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 417 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02854 Cmo15g00330 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02854 Cmo-Chr4:20351480 Cmo09g00524 Cmo-Chr9:2448784 0 dispersed
Cmo15g00330 Cmo-Chr15:1534075 Cmo04g02854 Cmo-Chr4:20351480 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02854 K20887 - csv:101208151 1184.86