Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g02855 | ATGGCCTTTCTCATTCTCCTTTTCCTCTCCGCCTTCACTCATTCCGCCACTGCCACTCTCTCCGCCGACTACTACCGCAATTCCTGTCCTGCATTCTCTCAGATCATCCGCGACACCGTCACCAACAAGCAAATCACCAACCCGACCACCGCTGCCGCCACCCTCCGCCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGATGCCTCCATCCTCATCTCCTCCACCCCTTTCAACTCCGCCGAGCGCGACGCTGACATCAACCTCTCCCTGCCCGGAGACGCCTTCGACGTCGTCGTCCGAGCCAAAACCGCCCTCGAACTCTCCTGCCCCAACACCGTCTCCTGTGCTGACATTCTAGCCACCGCCACTCGCGACCTCCTCACTATGGTCGGCGGCCCGTACTACACCGTCTTTCTCGGCCGAAAAGACGCGAAAATTTCCAGAGCCGCCGCCATTGAAGGCACTCTCCCCAGACCCTCCATGAGTGTCTCTGAGATCATTGGAATGTTCGGCTCCAGAGGATTTTCCGTTCAGGAAATGGTGGCGTTAAGCGGCGCTCATTCGATTGGCTTCTCGCATTGCAAGGAGTTCACGTCTGGGATCTTCAATTACAGCAAATCGCCGCCCTACGACAGCCATTATAACCCTAGATTCGCATTAGGGTTACAGAGAGCTTGCGCTGATTACCAGAAGAATCCGACTCTGTCCGTTTTCAACGACATTATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATTTGCAGAAGGGGTTAGGGGTTCTGAAATCCGACGGCGGATTTTACAGCGATTCAAGAACACGGCCGTGGGTGGAGAAATACGCTGCAGATGAGAGAGCCTTCTTCGAGGCGTTTTCTCGAGCAATGGTGAAGCTCGGTGGCTATGGCGTCAAAGTGGGAAACCAAGGAGAAATTAGACGCAGGTGCGATGCCTTTAACTGA | 966 | 54.55 | MAFLILLFLSAFTHSATATLSADYYRNSCPAFSQIIRDTVTNKQITNPTTAAATLRLFFHDCLPNGCDASILISSTPFNSAERDADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILATATRDLLTMVGGPYYTVFLGRKDAKISRAAAIEGTLPRPSMSVSEIIGMFGSRGFSVQEMVALSGAHSIGFSHCKEFTSGIFNYSKSPPYDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGVLKSDGGFYSDSRTRPWVEKYAADERAFFEAFSRAMVKLGGYGVKVGNQGEIRRRCDAFN | 321 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 20358428 | 20359393 | + | CmoCh04G028550.1 | Cmo04g02855 | 381830 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g02855 | 321 | Pfam | Peroxidase | 38 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Cmo04g02855 | 321 | ProSitePatterns | Peroxidases active site signature. | 51 | 62 | IPR019794 | GO:0004601 | |
| Cmo04g02855 | 321 | ProSiteProfiles | Plant heme peroxidase family profile. | 19 | 321 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Cmo04g02855 | 321 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g02855 | Cmo-Chr4:20358428 | Cmo11g01203 | Cmo-Chr11:7087447 | 2.19E-127 | dispersed | |
| Cmo20g01019 | Cmo-Chr20:6692431 | Cmo04g02855 | Cmo-Chr4:20358428 | 3.49E-99 | dispersed | |
| Cmo10g00159 | Cmo-Chr10:719459 | Cmo04g02855 | Cmo-Chr4:20358428 | 1.90E-123 | wgd | |
| Cmo11g00119 | Cmo-Chr11:619758 | Cmo04g02855 | Cmo-Chr4:20358428 | 1.02E-130 | wgd | |
| Cmo11g01084 | Cmo-Chr11:6074289 | Cmo04g02855 | Cmo-Chr4:20358428 | 9.01E-176 | wgd | |
| Cmo13g00930 | Cmo-Chr13:8182766 | Cmo04g02855 | Cmo-Chr4:20358428 | 1.68E-135 | wgd | |
| Cmo14g00639 | Cmo-Chr14:3216333 | Cmo04g02855 | Cmo-Chr4:20358428 | 3.40E-176 | wgd | |
| Cmo18g00116 | Cmo-Chr18:820299 | Cmo04g02855 | Cmo-Chr4:20358428 | 4.93E-137 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g02855 | K00430 | - | csv:105435603 | 570.081 |