Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02937 ATGAATGCGAATAGTTCTCGATTTCAGTCGCTTGGTCAGACCGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTATACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCATTTTCTGTAATTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACTGTTATCACCGGTGCGATTCCTGCAAGGATTATCTTCCTTACTGCTTTGGAGACTACCAAAGTGGGAACCTTAAAAATGGTTGAGCCATTGAAATTTTCTGAACCCACACAGGCGGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTCTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAAGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTGATGGGATCCGGGGATTGTATAAAGGTTTTGGATTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGTATCATCTGGAGGTTCTTAGGCCAAAACTCTGGTGCAGAGAAATTTGCTCCTAGCCATGCCCAACTTATTTCTGTTCAAGCTGCAGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACGACGCCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGCAGACAGCAAGACAAATTGTTGAAAACTTAATCGCCGAGGATGGATGGAAAGGCCTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACCTCAAGCGCCTGTGTGCAAAAGATGAACAGACTTGA 966 44.1 MNANSSRFQSLGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNAFSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGTLKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSSNTRYNGGLDVARKLIKSDGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSGAEKFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGQTARQIVENLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20803476 20811963 - CmoCh04G029370.1 Cmo04g02937 381912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02937 321 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Cmo04g02937 321 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Cmo04g02937 321 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Cmo04g02937 321 SUPERFAMILY Mitochondrial carrier 19 311 IPR023395 -
Cmo04g02937 321 Gene3D Mitochondrial carrier domain 26 321 IPR023395 -
Cmo04g02937 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 314 IPR018108 -
Cmo04g02937 321 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Cmo04g02937 321 Pfam Mitochondrial carrier protein 28 106 IPR018108 -
Cmo04g02937 321 Pfam Mitochondrial carrier protein 236 318 IPR018108 -
Cmo04g02937 321 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 319 - -
Cmo04g02937 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Cmo04g02937 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
Cmo04g02937 321 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 319 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02937 Cmo15g00236 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02937 Cmo-Chr4:20803476 Cmo09g00356 Cmo-Chr9:1537744 7.46E-88 dispersed
Cmo14g01603 Cmo-Chr14:12683302 Cmo04g02937 Cmo-Chr4:20803476 2.82E-108 transposed
Cmo15g00236 Cmo-Chr15:1176543 Cmo04g02937 Cmo-Chr4:20803476 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02937 K15121 - csv:101206140 593.964