Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02940 ATGGATCCTGAGGTTAATCGATATGTTTTGATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAGTCCATGCTTGACATTCTTGGCAAATGCAATATTGCCGCCGTCCATGGCGGCGCTCACAAAGTCATGAGAGCTGCTCTGCTCTCTGTTGTCAGTCCCACCATGATTAGAGATCGTCTTCTTCCTAAAGTTGATGACTTTATGCGATCCCATTTGAGGAATTGGGATCAACAAATCATTGACATCCAAGAGAAGACGAAAGAGATGGCTCTACGGTCTTCTATGAAGCAGATTGCCGGAATCGAGTCCGGTCCGTTATCGGAATCTTTCATCCCAGAGTTCTTTAAGCTTGTTCTCGGCACGCTCTCGCTCCCAATCGATCTTCCCGGCACGAACTACCGCCGAGGAATTCAGGCGAGGAAGAACATCGTAAAGCTGTTGCAGCAGCTGATAAACGAGAGAAGAGCCTCAGAGACACAAAAGGATGACATGCTTGGATTCTTCATGAGTGAAGAGAACAAGTACAAGCTAAACGATGAAGAGGTTATTGATCAAATCATCACAGTTTTGTACTCTGGCTATGAAACTGTTTCGACAACATCAATGATGGCTGTCAAGTTCCTCCATGATCATCCCAAAGTTCTTCAGCAACTAAGAGAAGAGCATTTTGCAATCAGAGAAAAGAAAAGGGCAGAGGACCCCATTGATTGGGATGATCTTAAAGCCATGAAGTTCACTCGTGCGGTGATATTCGAAACATCGAGGCTGGCCACAATTGTTAATGGGGTTTTGAGGAAAACTACGAAGGACATGGAGCTAAATGGGTTTCTCATTCCAAAAGGATGGAGGATTTATGTGTACACCAGAGAGATTAACTATGACCCTTTTCTCTATTCTGAACCATTAACCTTCAACCCATGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATTACTTCTTCATCTTCGGAGGTGGAACCAGACATTGCCCTGGCAAAGAACTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTGTTGAAGTTTCCAAGGGTGGAAGCTCCAAGTGGGTTCCACATTAGGGTTTCATCATACTGA 1149 44.04 MDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKVMRAALLSVVSPTMIRDRLLPKVDDFMRSHLRNWDQQIIDIQEKTKEMALRSSMKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIVKLLQQLINERRASETQKDDMLGFFMSEENKYKLNDEEVIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHFAIREKKRAEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPLTFNPWRWLDKNLESHNYFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20826192 20828385 + CmoCh04G029400.1 Cmo04g02940 381915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02940 382 SUPERFAMILY Cytochrome P450 1 363 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 Pfam Cytochrome P450 128 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 325 334 IPR017972 GO:0005506|GO:0016705
Cmo04g02940 382 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 380 - -
Cmo04g02940 382 PRINTS P450 superfamily signature 194 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS P450 superfamily signature 250 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS P450 superfamily signature 323 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 Gene3D Cytochrome P450 1 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 183 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 203 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 249 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 289 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 322 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PRINTS E-class P450 group I signature 332 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02940 382 PANTHER CYTOCHROME P450 26 1 380 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02940 Cmo15g00235 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02940 Cmo-Chr4:20826192 Cmo04g01189 Cmo-Chr4:6085173 2.76E-84 dispersed
Cmo15g00235 Cmo-Chr15:1161724 Cmo04g02940 Cmo-Chr4:20826192 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02940 K09590 - csv:101206858 721.465