Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02972 ATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAACTGAAGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATGTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATATCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTCATTGGACTCATACTTCTAAATGGTGAAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCTGGCGGCTCCAGAAACAGCAGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTTAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCGGTTATCGCTCCATCGAATGGCAAAGGTGACATTTTCAGGGGGCCATCAGAATAG 798 44.86 MQLKLASNLPTISSIEDPNTPILSPTISSTEEPMAVPAVQFPIFMAVRVLGMVVATLVFMWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGFQWTAGFVTFWYPGGSRNSRSTLLPWHVFFGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLLNSLGLLIVLLGGLVILAVIAPSNGKGDIFRGPSE 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21006270 21009710 + CmoCh04G029720.1 Cmo04g02972 381947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02972 265 PANTHER CYTOCHROME B561-RELATED 34 261 IPR043205 GO:0016491
Cmo04g02972 265 PANTHER B561, PUTATIVE-RELATED 34 261 - -
Cmo04g02972 265 ProSiteProfiles Cytochrome b561 domain profile. 46 250 IPR006593 -
Cmo04g02972 265 CDD Cyt_b561_ACYB-1_like 73 216 - -
Cmo04g02972 265 Pfam Eukaryotic cytochrome b561 82 214 IPR006593 -
Cmo04g02972 265 Gene3D - 34 262 - -
Cmo04g02972 265 SMART 561_7 82 208 IPR006593 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02972 Cmo15g00206 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02239 Cmo-Chr4:16746404 Cmo04g02972 Cmo-Chr4:21006270 1.53E-52 dispersed
Cmo04g02972 Cmo-Chr4:21006270 Cmo19g00423 Cmo-Chr19:5077696 2.70E-64 dispersed
Cmo15g00206 Cmo-Chr15:986101 Cmo04g02972 Cmo-Chr4:21006270 5.84E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02972 K08360 - csv:101212633 397.897