Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02984 ATGGCGGCCTTTATTTTGCCGCTGGTTATTACAACTCTGGCTTTGGCAGCGACGTCGTTTGTCATCTTATCTGTGTTATACGACGCCGTTTCTTGCTACTGGTGGACTCCTAGACGCATCAAAAAAAAGATGGCTATGCAAGGTGTGGGTGGCCCCAAACCCCGCCCTTTCCTCGGCAACATCCTTCACGTCACCGCCCTCCTCTCCAACTCCACCTCCCAAGACATGCCCTCCGTCTCCCACGACCTCGTCCCCCGCCTCCTCCCGCACTATCTCGTCTGGACCGCCCAATTCGGGAAGAGATTTATATTTTGGAATGGGATTGAGCCAAGAATGTGTCTGGCTGAAACCGACTTGATCAAAGAGCTTTTGTCCAAACACAGCGCCGTTACCGGCAAGTCGTGGCTCCAACAACAGGGCTCCAACCACTTTATTGGTAGAGGTCTCTTAATGGCCAACGGCCAAAACTGGTTCCATCAACGACATATGGTCGCTCCCGCCTTCCTCGGCAACCGTCTCAAGAGTTACGCGGGATACATGGTTGAATGCACGAGAGAAATGCTTATATCATTAGAAAACGAGGTCAAATCGGGACGAACTGAGTTCGAAATCGGCGAGTGCATGACAAGAATCACGGCCGATATAATTTCCAAAACCGAGTTTGGAAGCAGCTACGAAAAGGGAAAACAAATCTTTCATTTACTCACGACTCTACAGAATCTCTGTGCTCAAGCTAGCCGCCACCTCTGCCTTCCTGGTAGCAGATTTTTTCCGAGTAAATATAACCGAGAAATAAAGGCATTAAAAGGGAAAATGGAGGGATTGTTAATGGAGATCATAGAGAGCAGAAAGGAGTGTGTGGAGAATGGTAATGATTTATTAGGAATGTTGCTGAATGAGATGCAGAATAAACGAGACAATAAGGGTTTTAATTTGAATTTGCAAATAATTATGGATGAATGCAAGACCTTCTTCTTTGCCGGCCATGAAACCACAGCTCTCTTGCTCACTTGGACTCTCATGTTATTAGCCACCAACCCTTCTTGGCAACACAAGGTTCGAGCTGAAGTCATGGCCGTCTGCAACCGCCAAGCTCCCTCGCTCGACCATCTCCCCAAACTCTCCCTGTTGGGTAAGGTGATAAATGAATCCCTGAGGCTATACCCACCCGCGAGCATTCTTCCAAGGATGGCGTTTGAGGATATAAAGCTCGGGGACTTAGAGATCCCAAAAGGGTTGTCGATATGGATCCCAGTGCTAGCCATTCACCACAGTGAGGAGCTATGGGGAAAGGACGCGAATGAGTTCAACCCCGAAAGATTTGAGAGCTCGAAGGCGTTCACGTCGGGTAGGTTCATACCATTTGCTTCTGGACCGCGCAACTGTGTCGGCCAATCTTTCGCTGTCATGGAAACGAAGATCATATTGGCCATGCTCATCGCCAAGTTTTCCTTCACCATCTCCCCAAACTATCGCCATGCACCCGTCGTTGTGCTCACTATCAAACCTAAATATGGTGTTCAAGTTTGCTTGACCCCGGTGACATCGAGCTTGGTCGGTTTGTGA 1566 48.72 MAAFILPLVITTLALAATSFVILSVLYDAVSCYWWTPRRIKKKMAMQGVGGPKPRPFLGNILHVTALLSNSTSQDMPSVSHDLVPRLLPHYLVWTAQFGKRFIFWNGIEPRMCLAETDLIKELLSKHSAVTGKSWLQQQGSNHFIGRGLLMANGQNWFHQRHMVAPAFLGNRLKSYAGYMVECTREMLISLENEVKSGRTEFEIGECMTRITADIISKTEFGSSYEKGKQIFHLLTTLQNLCAQASRHLCLPGSRFFPSKYNREIKALKGKMEGLLMEIIESRKECVENGNDLLGMLLNEMQNKRDNKGFNLNLQIIMDECKTFFFAGHETTALLLTWTLMLLATNPSWQHKVRAEVMAVCNRQAPSLDHLPKLSLLGKVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFESSKAFTSGRFIPFASGPRNCVGQSFAVMETKIILAMLIAKFSFTISPNYRHAPVVVLTIKPKYGVQVCLTPVTSSLVGL 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21063697 21065745 - CmoCh04G029840.1 Cmo04g02984 381959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02984 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 510 - -
Cmo04g02984 521 Gene3D Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 Coils Coil 265 285 - -
Cmo04g02984 521 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 510 - -
Cmo04g02984 521 SUPERFAMILY Cytochrome P450 51 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02984 521 Pfam Cytochrome P450 97 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02984 Cmo-Chr4:21063697 Cmo14g00824 Cmo-Chr14:4261945 0 dispersed
Cmo15g00197 Cmo-Chr15:906216 Cmo04g02984 Cmo-Chr4:21063697 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02984 K10717 - csv:101215037 860.522