Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g03046 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGCTGTCCGGCATTGTGCTACTTCTTCAGGGCATAACGAGTCCAAGTTGGCGGCTATTATGGCGTCATTCATCATTCAGAAACCTCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTAAAAACGCTTGAGAGCATTGGCGCTCTTGAAGAGTTTATGTTGAAGCATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAACTGCATTCATCAAAGCATGCCAAGAACAAATCGATATCCTAAAAAACAACATTAATGAGGATGACGCACACTCAAAGAGCTGGCTTGGTGCTAGGATTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTTCATTCAGTAACATCACAATTTGATAAGTTAAGAGCCATTCGGTTTCAAGATATAATAAACAAAGCAGTACCAAGAAGAAAACCCAACCAAGTAAATAAACCACGTTCTGCAAATGCCCCCAACTATAATAATATGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGACGATGAAACTCGTGCACTTCAGGTTGAGTTGACCAGTCTTCTTGATGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTAATGTCTACACATGTTTTGCAGCAAGCACAACAAATCGAATTTCTTTATGAACAGGCTGTTGAAGCTACAAAGAACGTCGAGCTTGGTAATAAAGAACTTGCCCAAGCAATTCAGCGGAATAGCAGCAGTAGAACCTTCCTTCTGCTCTTTCTATTTGTGCTAACATTTTCAATTCTCTTTCTTGATTGGTATAGTTGA 930 40.75 MAKFRDRTEDFKDAVRHCATSSGHNESKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNNINEDDAHSKSWLGARIDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPNYNNMELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELAQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21336381 21339554 - CmoCh04G030460.1 Cmo04g03046 382021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g03046 309 SUPERFAMILY t-snare proteins 61 273 IPR010989 GO:0016020|GO:0016192
Cmo04g03046 309 PANTHER SYNTAXIN-18 5 309 - -
Cmo04g03046 309 PANTHER SYNTAXIN-18 5 309 - -
Cmo04g03046 309 MobiDBLite consensus disorder prediction 176 190 - -
Cmo04g03046 309 MobiDBLite consensus disorder prediction 171 193 - -
Cmo04g03046 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Cmo04g03046 309 Gene3D - 211 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g03046 Cmo15g00129 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g03046 Cmo-Chr4:21336381 Cmo15g00129 Cmo-Chr15:606352 4.14E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g03046 K08492 - csv:101207161 554.673