Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g03095 ATGGAATTAAAGGGGTTTTGGAAGGGAGAAATAATGGTGTGGCTGGTTGTACTAATGGTGATCGTTGTTAGAAGAGGAGAGGGGCAGCTGGTGCAAAATTTTTATGGATCCAGCTGCCCGGACGTGGAACAAATAGTGAGGCAAGCCGTTCAGAATAAGCTCTCTCAAACTTTTATTACCATTCCCGCTACTCTCCGTCTCTTCTTCCACGACTGTTTTGTTGAGGGATGCGATGCTTCAGTGATGATTTCATCGCCGAGCGGAGACGCCGAGAAGGATGCTCAAGATAACCTCTCCCTCGCCGGAGATGGTTTCGACACCGTCGTTAAGGCTAAGCAGGCCGTTGAAGCCGCCTGTCCCGGCAAAGTGTCATGCGCGGATATATTGGCTCTCGCCGCCCGAGACGTCGTTGTCCTCGCCGGAGGCCCAAATTTCAACGTCGAGTTAGGACGGCGTGACGGCCTCATTTCCAAAGCCTCACGCGTCGACGGCAATTTACCATCTCCAAATTTCGACCTAAACGCTCTGACTTCAATCTTCGCCAAAAACGCCCTCTCGCAAACCGACATGATTGCTCTCTCCGGCGCCCACACCATCGGCGCCTCCCACTGTAACCGCTTCGCCGACCGCCTCTTCTCCTCCTCCGGCGCTGATTCCTCGCTTAACCGAGCCTACGCCGAACAGCTAAAGCAAGCCTGTCCTCGAAATGTTGACCCAAACGTCGTGGTCCAGCTAGATCCGACCACTCCTAACACGTTCGACAACGTGTATTACCAGAATCTAATAGACGGGAAAGGACTATTCAAATCGGACGAGATTCTGTTCACGAGCTCGGCGTCGAAGTCGACGGTGGTGGAATTTGCGAACAATGGAGGGGAGTTCAATGCCGCATTTGTGGCGGCGATGAGGAAGCTGGGGAGAGTTGGGGTTAAGACGGGGAGGGCGGGAGAGATAAGGAGAGATTGCAGCGCCTTTAATTGA 981 53.31 MELKGFWKGEIMVWLVVLMVIVVRRGEGQLVQNFYGSSCPDVEQIVRQAVQNKLSQTFITIPATLRLFFHDCFVEGCDASVMISSPSGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGKVSCADILALAARDVVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNALTSIFAKNALSQTDMIALSGAHTIGASHCNRFADRLFSSSGADSSLNRAYAEQLKQACPRNVDPNVVVQLDPTTPNTFDNVYYQNLIDGKGLFKSDEILFTSSASKSTVVEFANNGGEFNAAFVAAMRKLGRVGVKTGRAGEIRRDCSAFN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21554721 21556023 + CmoCh04G030950.1 Cmo04g03095 382070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g03095 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PANTHER - 13 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 Gene3D Peroxidase, domain 2 167 305 - -
Cmo04g03095 326 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Cmo04g03095 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g03095 326 Gene3D - 33 326 - -
Cmo04g03095 326 PANTHER PEROXIDASE 13 326 - -
Cmo04g03095 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cmo04g03095 326 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g03095 Cmo-Chr4:21554721 Cmo07g00671 Cmo-Chr7:3025898 1.56E-135 dispersed
Cmo15g00076 Cmo-Chr15:397875 Cmo04g03095 Cmo-Chr4:21554721 4.97E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g03095 K00430 - csv:101213343 518.85