Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g03096 ATGGGTCGGGTGAATGAGAAGCTTGTGGCCTTTTTGAACAACCGATGGTTGGTTTTTGTAGCTGCAATATGGGTTCAATCTTGCGCTGGAATTGGGTATCTTTTCGGAAGCATATCGCCGGTGATCAAGACGAATTTGAGTTATAATCAGAAGCAAATTGCGCGGCTCGGTGTCGCGAAGGATCTTGGCGATAGCGTTGGCATTTTGGCCGGAACCTTGTCGGAGATATTGCCGTTCTGGGGAACTCTATTAGTCGGTGCTCTCAATAACTTTATTGGGTATGGTTGGGTTTGGCTCATCGTCACTGGTCGAGCTCCTGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTGTTTGTGGGAACGAATGGGGAGACATACTTCAACACAGTTTCTCTGGTTTCTTGCGTACAAAACTTCCCGAAGAGTAGGGGTCCGGTGGTCGGGATCTTGAAAGGCTTTGCTGGTTTAAGTGGTGCGATTTTGACTCAAATATATGCAATCATGCATTTCCCTGATTCAGCCAATCTTATATTCATGATAGCAGTAGGTCCTGCACTTGTGGCTATTGGTATGATGTTTTTTATCCGACCCGTTGCTGGTCATCGACAAGTGAGGCCGTCCGATGGCGTGAGCTTTAGTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATATCTTATGGGAGTCATGCTTGTTGAGGATCTTGTTGATTTGAGCCCCACTGTGATAGCCATTTTCACTGCTGTTATGTTTGTTATCCTTCTTACTCCCTTTTTGATTCCTGTGATATTGACTTTTAGCTCGGAAACAACGGCGTATCCCGAGCAAGAGGCTCTCCTACAACAGTCACCTAAACAGGAACCTGCTAGATCCGAACCAGATGGTCATGAAGTGATATTTAGTGAGGTCGAAGATGAAAAATCAGAGGGAGAGGACTTACTCCCTGCGTCGGAGCGACAAAAACGCATTGCTCAGTTGCAAGCAAGACTATTGCAGGCAGCTGCAGAAGGAGCAGTACGAGTCAAGAGGAGGAAGGGTCCTCGTAGAGGGGAGGACTTTACTTTGGGTCAAGCTTTGATCAAAGCAGACTTTTGGCTTATATTCTTCTCCCTTCTCCTTGGCTCTGGAACTGGGTTGACCGTGATCGATAACCTCGGACAGATGAGCCAATCTTTAGGCTATAATAATACGCATATTTTTGTATCCCTGATCAGCATATGGAACTTTCTTGGCCGTGTCGGTGGCGGATACTTCTCTGAGATCGTTGTGAGAGATTATGCTTATCCAAGGCCTATTGCTATGGCAACTGCACAATTCCTTATGATATTTGGGCATATCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGCACACTCATCACGGGGCTCGGATACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCGGAATTGTTTGGGTTGAAAAAGTTTGGTGCTTTATACAACTTCCTGACTCTCTCAACTCCGATGGGATCTCTGATATTTTCGGGCCTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCACATAATGGTCTCTCACAGCTGCAGAGCTCCTCATCAGTTTGGTTCAGCAGACTTCATGTCGATGCACCGCTCAAGTGCGACGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGCACCGGACAAAAGGTGTGTACTACAACCTGTATGGAAAATCCCGAGCTTCGACGCTCTCCTAG 1791 46.73 MGRVNEKLVAFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYNQKQIARLGVAKDLGDSVGILAGTLSEILPFWGTLLVGALNNFIGYGWVWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHFPDSANLIFMIAVGPALVAIGMMFFIRPVAGHRQVRPSDGVSFSSVYGVCLLLAAYLMGVMLVEDLVDLSPTVIAIFTAVMFVILLTPFLIPVILTFSSETTAYPEQEALLQQSPKQEPARSEPDGHEVIFSEVEDEKSEGEDLLPASERQKRIAQLQARLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYNNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPIAMATAQFLMIFGHIFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSTPMGSLIFSGLIASSIYDSEAEKQAHNGLSQLQSSSSVWFSRLHVDAPLKCDGAICFFLTCMIMAGFCAIAGMLSLILVHRTKGVYYNLYGKSRASTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21556380 21559440 - CmoCh04G030960.1 Cmo04g03096 382071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g03096 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cmo04g03096 596 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Cmo04g03096 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 591 - -
Cmo04g03096 596 Pfam Nodulin-like 15 262 IPR010658 -
Cmo04g03096 596 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 591 - -
Cmo04g03096 596 CDD MFS_Mch1p_like 15 568 - -
Cmo04g03096 596 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Cmo04g03096 596 Gene3D MFS general substrate transporter like domains 313 537 IPR036259 -
Cmo04g03096 596 Coils Coil 316 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g03096 Cmo-Chr4:21556380 Cmo14g01400 Cmo-Chr14:11493196 3.12E-115 dispersed
Cmo15g00075 Cmo-Chr15:395182 Cmo04g03096 Cmo-Chr4:21556380 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g03096 - - csv:101211655 1021.54