Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00063 ATGGCTTCCGTCTCATTTTACCGCCCAAGCTTTGTGTTCTCTTCATTTCCGAACCGTGTTCCGACCTCAAATCCTCTATTTCATGGAGTCCAATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGTGGTTCCCTTCCGGTGGCGAGATTTGGGTTTAAACCCGAGTTCTTGCCTGACCCGGATCACGCCGAGGGCTTTGTTAGAGAGTTATTCGGCAAAGCTGAGAGCGTTCTTTACACGATTGCCGACGCCGCCGTGTCTGCTTCTCCGGAGAATGTTACCACCGCCAAACAGACGGAGGATTGGTTTACGGGGATCACCAATTATATGGAGAGCATCCTTAAAATTCTTAAGGATGGCCTTTCTGCTGTACATGTTCCTTATGCCTATGGTTTTGCCATTATACTCCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTGACGAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCGCAAGTGAAGGCTGTTCAGCAACGCTATGCTGGGGATCAGGAGAGGATTCAAGTTGAGACCGCTCGACTGTACAAATTAGCTGGCATAAACCCACTGGCAGGATGCCTACCCACATTGGCAACAATTCCTGTATGGATTGGACTATACAGAGCTCTTTCAAATGTGGCCAACGAGGGTCTCCTCACGGAAGGCTTTTTCTGGATACCCTCTCTGGCTGGTCCAACCACAATTGCTTCTCGACAAAATGGGAGCGGTATCTCTTGGCTCTTTCCATTTGTTGATGGCCATCCACCACTTGGGTGGTCAGATACTTTTGCGTATCTTGTCCTGCCGGTGTTGCTGGTCGTCTCACAGTACATCTCTGTTCAAATTATGCAATCGTCGCAGAATAATGATCCAAACATGAAGAGTTCTCAAGCCATATCGAAGTTCCTACCGTTAATGATCGGATATTTTGCACTTTCGGTTCCTTCGGGTCTAAGCCTTTACTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGTGCGAAAACCCCGGACAAACAATTGATGGATGAAATCATGAAACAAGAACAACCCCAAATCCAGAGCCAAGCGCCCAAGTTAGACGCAACCTCGAGTAGCACGGTAGCTCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAACCTGGTGAAAGATTTAAACAGATAAAGGAGCAAGAGGCTAGGTTGAGACAGCAAAGTGAAGAAGAAAAAAGGAAAGCTGAAGACCAAGGCTCCATATCTATGTCTACCATGCAACGAACAGATGTGGAAAACAAGCCAAGTGCAACTCCAGGGGAGGGAGTACACGAGACATACACTGGAGTGGCCAAGGATGCCAAACTAAAGGGAGAAGAACAAAGAGAGAAAGGCAATTGTTTCGATCAGCTCGATACCGTGAAGAAAACTCCATCTCCATCGGAGGTGGTATTCGAGCTTCTTTTTCCCGATGGGCAGTTGAGTTTCAGAGTTTACTCGTCCATCATAGATTTGGATTGGGAATGA 1548 47.16 MASVSFYRPSFVFSSFPNRVPTSNPLFHGVQFRGLSHHKPFLRGSLPVARFGFKPEFLPDPDHAEGFVRELFGKAESVLYTIADAAVSASPENVTTAKQTEDWFTGITNYMESILKILKDGLSAVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQVETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQAISKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQLMDEIMKQEQPQIQSQAPKLDATSSSTVARQEEKLTAEGLKPGERFKQIKEQEARLRQQSEEEKRKAEDQGSISMSTMQRTDVENKPSATPGEGVHETYTGVAKDAKLKGEEQREKGNCFDQLDTVKKTPSPSEVVFELLFPDGQLSFRVYSSIIDLDWE 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 234271 238498 - CmoCh05G000630.1 Cmo05g00063 382198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00063 515 MobiDBLite consensus disorder prediction 363 482 - -
Cmo05g00063 515 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 345 IPR028055 -
Cmo05g00063 515 MobiDBLite consensus disorder prediction 426 441 - -
Cmo05g00063 515 PANTHER OXA1 48 427 IPR001708 GO:0016021|GO:0032977
Cmo05g00063 515 Pfam 60Kd inner membrane protein 131 345 IPR001708 GO:0016021|GO:0032977
Cmo05g00063 515 MobiDBLite consensus disorder prediction 389 425 - -
Cmo05g00063 515 Coils Coil 401 425 - -
Cmo05g00063 515 PANTHER BNAA09G28180D PROTEIN 48 427 - -
Cmo05g00063 515 MobiDBLite consensus disorder prediction 363 387 - -
Cmo05g00063 515 MobiDBLite consensus disorder prediction 455 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00063 Cmo-Chr5:234271 Cmo04g00734 Cmo-Chr4:3649167 3.28E-10 dispersed
Cmo01g00616 Cmo-Chr1:3166970 Cmo05g00063 Cmo-Chr5:234271 1.04E-146 transposed
Cmo12g00034 Cmo-Chr12:197498 Cmo05g00063 Cmo-Chr5:234271 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00063 K03217 - csv:101205346 820.076