Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00106 ATGTTGAAGCTATCATTCTCACCTGTCCGCATTTTCATCTTCCTCTTCGTTATCTCTTTCCTCTTCTCTGCGTGGTTGCTTCCTTCCACCGCCCTTCCCCTCTCCGACTCGGATCAGCCGCTTCTTGCAAACGCTACTCTCCAGTCCAATAACGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTTGCAGACATAATTGATCGTGCTTTGGAGAATGAGTTCAAGGACAATGACCAGAATGAAGAAATTGATTCAGGAAGCTTCAACAACAGCGTAGCAGAGAAGCAGGCAATTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAATGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAAGGATAATGTGTTTATCATATCTAACTTCAAGTCTAAATATCCAGTGCTACAACTAGACTTGAGATTGATCTCAGACTTGGTTATCGTAATTGTCTCTGCAACCTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTCCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCTTGCTCCAAATTTTTCTATTTATATGCCTCAGTGGGATCACAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTATTTGTTGGAGCATTCCTATCAATGTCCTCAACAGCAGTGGTTCTGAAGTTTTTGATGGAAAAGAACTCGACTAATGCTCTTCATGGACAAGACTGTGCTGTTGGGTTATTGTTTGCTTTGCTTCCAGTATTAGGTGGGAATTCTGGTATTCTTAAAGGAGTGATGTCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTTGGTTGTTTTGTCAATTTTATCCCGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAATGAACTCTATCAATTAGCGTCAGTGGCGTTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACACACACTTGAACAAATAGAGCCTATAAGGAACCTTTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTTGATATATTACTAGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGATATAACAACAAGACATCAGTTTTGGTTGGAATGTCACTGGCTCAGATTGGAGAGTTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGGAAATTGTATCTACTGCTTATTGGGACCACAGCTCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGCTGATACCAGCTGTCGTGCATTTAGGCGTGCTATTGCGATGGTTCTCTCCAGATAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGGGCAATGTTGATATTTCTGCTGGAGGAGTCAAATTCTGGGCTGCTCATCATCCCCCATGTGCAAGTGAAGTCGATTGAGCCAATCTGTATATTTCATGTTTTTCTAGCATCATATAAAAGCGTGTCCAGAATCATTTTTTGTTACACTCAACTGACCTTTAGATATGGAAAAATCAGATAG 1878 41.69 MLKLSFSPVRIFIFLFVISFLFSAWLLPSTALPLSDSDQPLLANATLQSNNVSSPRNKEGSFADIIDRALENEFKDNDQNEEIDSGSFNNSVAEKQAILETVARVKSKKNDTKEEKFQLQNVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFICLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQDCAVGLLFALLPVLGGNSGILKGVMSMSKVLVILVTFLVVLSILSRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRAMLIFLLEESNSGLLIIPHVQVKSIEPICIFHVFLASYKSVSRIIFCYTQLTFRYGKIR 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 420474 428557 + CmoCh05G001060.1 Cmo05g00106 382241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00106 625 Gene3D - 161 535 IPR038770 -
Cmo05g00106 625 Pfam Sodium/hydrogen exchanger family 168 528 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo05g00106 625 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 13 570 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cmo05g00106 625 PANTHER K(+) EFFLUX ANTIPORTER 6 13 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00106 Cmo-Chr5:420474 Cmo10g00738 Cmo-Chr10:3378959 0 dispersed
Cmo12g00576 Cmo-Chr12:3555280 Cmo05g00106 Cmo-Chr5:420474 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00106 - - csv:101217282 967.992