Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00185 ATGGCTGCAACTTTTGTACTCATTTCCATCTTTTTTCCTCTTCTTCTTTGCTTTTTCTGGAAAATTCATAAGAACAACAGGATTCCAAACAAGAAACTCCCTCCTGGATCAATGGGCTGGCCTCTAATTGGCGAGACATTTCATTTCTACTCCCAAGATCTAACCTTTTTCTTTAGAAAACAAAAAAGGTACGGGGAGATATTCAAGACTCACATTCATGGGTGTCCCTGTGTGATGTTGACCACTCCCGAGGCAGCTCGCTTCGTGCTCGTCACACAGGCTCATCTCTTCAAACCCACATACCCACAAAGCAAAGAGCGACTCATCGGACCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGCCTTCGTAAGCTAATCCAAAGCTCCCTCTCACCGGACCCTGTTCGGACCTTGGTCCCTCACATCCACGCCCTCGCTATCTCTACATTGCCCTCGTGGCTCAATGGCCATCTCATCAATACTCTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTCTGGTAATTTTCGGGCATTTGGAGAACGCCAATTACAGAGACGAACTATTGAAGAACTATTCCATAGTGAACAAAGGCTACAATTCTTTCCCCACCAACTTTCCCGGAAGCATTTACAAAAAAGCACTTAAAGCAAGAAACAGACTGGGAGAGATCATAAACTGTATAATCTCAGAGAAAAGGGAGCAGAGAAAGGAATTAGAGGAGAAGAATCTGTTGGCGTGTCTCCTAAAATGGAGAGATGAAAAAGGAGAAAGCTTAAGCGACGACCAGATCGCCGACAACATCATCGGAGTCCTGTTTGCGGCTCAGGACACCACCGCCAGTGTTCTCACTTGGGTTGTTAAATATCTCCACGATAATGACAAAATTCTAGAAGCAGTCAAGGCGGAACAAAGGGCAATTCAAGAAGCCATTAATGAGGGGAGCCGAGCAATGAGCTGGGCAGACACACGAAACATGCCATTTACCAACAAGGTCGTGTTGGAGAGCTTGAGAATGGCGACCGTTATATCTTTCTCATTTAGAGAAGCTGTGACCGACGTTGAATACAATGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCATCACAATCCTGACTACTTTCTACACCCTCACAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGGCCCAATACATTCATTCCATTTGGCAGTGGGGTCCATGCCTGCCCTGGTAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATTTAGTCACCAAATTCAGGTGGGAATTAGCAGGACAGAAAGATGGGATTGAGCATGGCCCATTTCCAGTTCCTAGGGATGGGCTTCCTATCAGACTCTGGAGATTATCAAACTGA 1410 44.75 MAATFVLISIFFPLLLCFFWKIHKNNRIPNKKLPPGSMGWPLIGETFHFYSQDLTFFFRKQKRYGEIFKTHIHGCPCVMLTTPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRTLVPHIHALAISTLPSWLNGHLINTLHQMKKFSFEVGILVIFGHLENANYRDELLKNYSIVNKGYNSFPTNFPGSIYKKALKARNRLGEIINCIISEKREQRKELEEKNLLACLLKWRDEKGESLSDDQIADNIIGVLFAAQDTTASVLTWVVKYLHDNDKILEAVKAEQRAIQEAINEGSRAMSWADTRNMPFTNKVVLESLRMATVISFSFREAVTDVEYNGYLIPKGWKVMPLFRNIHHNPDYFLHPHKFDPSRFEVAPRPNTFIPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQKDGIEHGPFPVPRDGLPIRLWRLSN 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 818448 820949 + CmoCh05G001850.1 Cmo05g00185 382320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00185 469 PANTHER CYTOCHROME P450 26 9 465 - -
Cmo05g00185 469 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 465 - -
Cmo05g00185 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Cmo05g00185 469 Gene3D Cytochrome P450 22 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 Pfam Cytochrome P450 34 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 SUPERFAMILY Cytochrome P450 30 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 Coils Coil 298 318 - -
Cmo05g00185 469 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00185 469 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01899 Cmo05g00185 CCT
Cmo01g01899 Cmo05g00185 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01039 Cmo-Chr1:8195994 Cmo05g00185 Cmo-Chr5:818448 7.93E-79 dispersed
Cmo05g00185 Cmo-Chr5:818448 Cmo16g00553 Cmo-Chr16:2690840 0 dispersed
Cmo07g01086 Cmo-Chr7:5656244 Cmo05g00185 Cmo-Chr5:818448 8.00E-40 transposed
Cmo01g01899 Cmo-Chr1:13671091 Cmo05g00185 Cmo-Chr5:818448 0 wgd
Cmo11g01361 Cmo-Chr11:9491145 Cmo05g00185 Cmo-Chr5:818448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00185 K09843 - vvi:100245540 653.284