Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00205 | ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGCGGCCGATTCTAATTTTTCCGTTGTTCAAACCGAATCGCTCGTTCAGCGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATCGAGAAATTGGCGTTGAACTCCCCCGATCATTTCCCGATTCCCCTGATTTATCTGCAAAGCCTAGATCGCCTCTTGGGGGTTCCGAACGTTGGTCCTCGCCGGCTTTGCCCCAGCCTTTGCCTCTGCCGGAGTTATTCCCGGTTCGGAATCCAGAGTCCGATTCTTGGTTTTCTGGCCAAGGCCGTGTGGTCTCGCCTATTGAAACTCCTGTCCGTAATTCTGCTATTAAAACTGTTAGGAAGAGCTCTGATCGTGCAACAACGAACGTAAATGGAGGTCTGGGCAACAATCAAAGGCGAGTTGCTACAGATTGTAAGTTGGAAGTTGTTAATGGCAATACAGGAGGAACTGGGGCTACCACATTTACAAGCCCTCATAGTCCCTCTGTGAACTCAGGTAAATCCCTTTCGATTAAGGAGTTTGTTTTTGGTTGTTTGGATCAGCCTCCAAACAGCAAAGTCAGGGGATCCCCAACTCATCCCAGTATTCAAAGAGGTAACTACAGTTTGACACCTAAGACTTCGTCGTCAAAGAGTGCCCCAACAAGCATTTTACCGAGTCCGACCGCTAGCCCACGAAGATCATATACTGGAGATCTTTTCGTTTCTGGTTTGCCTCGCCATGAATATCAGGAATCTCCTTTCAATAATTCTCCCAAATTTCCACCCCTTAAGACTCCACACACTTCTCAACCTTCTCCTCTCCATAGCCCGTCAGCTCGAAGTTTCGTAAGCGGTCCCAAATCTCCTAACGATGTGAAATTTCCGACGCATTCTAAGTTACAAAAAGATTGTAGTAGTACAGATCGGTCTGAAAACCTCGGTCATGTCAATGCTCATCCATTGCCACTTCCTCCTCCATTAGCACACTCTTCACAATCATCTCCACTGTCGCTTTCGTCGAGCGTTCATCGTGTTAATGAGAAGCCATACATTTCATCTACGAAAAGTCGGTGGCAAAAAGGAAAGCTCATTGGACGTGGTACTTTTGGAAGTGTTTATCTTGCAACCAACAGTGAAACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATGTGCTGAAAGTATAAAGCAACTAGAGCAGGAGATTAAAGTTCTCAGTCAACTTAAGCATCCAAATATTGTGCAGTATTATGGAAGCGAAATAATCGATGATCATTTCTATATATATTTGGAGTATGTTTATCCCGGGTCGATAAATAAATACGTTCGTGAACGTTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATCCACAGGGATATCAAAGGTGCAAACTTGCTAGTTGACTCGTCAGGAGTCGTCAAACTTGCAGATTTCGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGTACTGGATGGCTCCGGAGGTCATGAAGGCTGCTATGTTGAAAGATGCCAACCCTAATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGGATGGAAAACCTCCGTGGAGTGAGTTTGAAGGGCATCAAGCCATGTTCAAGGTGTTGAATAAAACCCCACCGATCCCGGAAAAGCTATCTCCAGAAGGGAAAGACTTCCTCCAGTGCTGCTTTCAAAGGAATCCAGCTGACAGACCAACAGCCATGGCGCTCCTTGACCATCCATTCTTAAGATCCTCAAATGACTCGAATGTTTCAACCCCCACGTCTGCATTTTCGACAATGAACCGCATGGAAAAACTCTTGAGTCCGAAGGACCACCGTAGTCCCAAAGGGGATCAGGCGCAAAACTCTTCTGGAACTTTGGCTGAAAATGGTTATCTGTCGTGCCCCCTTCAACGAACATTTCAAGCAATATTCCTGCCAGTGCCGTTAACAACCATCCCTTCGCTATTTCAAGGACTCATAAAAGGGAAGTGCCTCACCTCTGAGCTACAGTTGTGGATATTTACAGGCAAATACTCGACCGAGGAAGTTAGCCACCCTCTGCAGAAGGCCACAGGAGCTGGGATAGAGATCATCTTTCCCTCTGCCTGTTTTAACGACAAAACTCATTCTTTCTTGAACAAACTCTCATAG | 2283 | 45.9 | MPFFHKSASNSRLQQKAADSNFSVVQTESLVQRRLTRQRKLRHLTDREIGVELPRSFPDSPDLSAKPRSPLGGSERWSSPALPQPLPLPELFPVRNPESDSWFSGQGRVVSPIETPVRNSAIKTVRKSSDRATTNVNGGLGNNQRRVATDCKLEVVNGNTGGTGATTFTSPHSPSVNSGKSLSIKEFVFGCLDQPPNSKVRGSPTHPSIQRGNYSLTPKTSSSKSAPTSILPSPTASPRRSYTGDLFVSGLPRHEYQESPFNNSPKFPPLKTPHTSQPSPLHSPSARSFVSGPKSPNDVKFPTHSKLQKDCSSTDRSENLGHVNAHPLPLPPPLAHSSQSSPLSLSSSVHRVNEKPYISSTKSRWQKGKLIGRGTFGSVYLATNSETGALCAMKEVDLIPDDPKCAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIDDHFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVMKAAMLKDANPNLALAVDIWSLGCTIIEMLDGKPPWSEFEGHQAMFKVLNKTPPIPEKLSPEGKDFLQCCFQRNPADRPTAMALLDHPFLRSSNDSNVSTPTSAFSTMNRMEKLLSPKDHRSPKGDQAQNSSGTLAENGYLSCPLQRTFQAIFLPVPLTTIPSLFQGLIKGKCLTSELQLWIFTGKYSTEEVSHPLQKATGAGIEIIFPSACFNDKTHSFLNKLS | 760 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 895707 | 899418 | - | CmoCh05G002050.1 | Cmo05g00205 | 382340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00205 | 760 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 675 | - | - | |
Cmo05g00205 | 760 | PANTHER | - | 1 | 675 | - | - | |
Cmo05g00205 | 760 | ProSitePatterns | Protein kinases ATP-binding region signature. | 371 | 394 | IPR017441 | GO:0005524 | |
Cmo05g00205 | 760 | SMART | serkin_6 | 365 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 52 | 84 | - | - | |
Cmo05g00205 | 760 | Gene3D | Transferase(Phosphotransferase) domain 1 | 361 | 665 | - | - | |
Cmo05g00205 | 760 | ProSiteProfiles | Protein kinase domain profile. | 365 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cmo05g00205 | 760 | SUPERFAMILY | Protein kinase-like (PK-like) | 361 | 642 | IPR011009 | - | |
Cmo05g00205 | 760 | Pfam | Protein kinase domain | 366 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 195 | 344 | - | - | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 256 | 292 | - | - | |
Cmo05g00205 | 760 | MobiDBLite | consensus disorder prediction | 198 | 242 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g00205 | Cmo12g00455 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g01003 | Cmo-Chr3:7544064 | Cmo05g00205 | Cmo-Chr5:895707 | 6.04E-157 | dispersed | |
Cmo05g00205 | Cmo-Chr5:895707 | Cmo16g00126 | Cmo-Chr16:566206 | 5.17E-109 | dispersed | |
Cmo12g00455 | Cmo-Chr12:2785245 | Cmo05g00205 | Cmo-Chr5:895707 | 0 | wgd | |
Cmo05g00205 | Cmo-Chr5:895707 | Cmo07g00734 | Cmo-Chr7:3325183 | 1.84E-157 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74341 | PF00069 | Pkinase | 2.80E-68 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00205 | - | - | cmo:103487921 | 1031.94 |