Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00205 ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGCGGCCGATTCTAATTTTTCCGTTGTTCAAACCGAATCGCTCGTTCAGCGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATCGAGAAATTGGCGTTGAACTCCCCCGATCATTTCCCGATTCCCCTGATTTATCTGCAAAGCCTAGATCGCCTCTTGGGGGTTCCGAACGTTGGTCCTCGCCGGCTTTGCCCCAGCCTTTGCCTCTGCCGGAGTTATTCCCGGTTCGGAATCCAGAGTCCGATTCTTGGTTTTCTGGCCAAGGCCGTGTGGTCTCGCCTATTGAAACTCCTGTCCGTAATTCTGCTATTAAAACTGTTAGGAAGAGCTCTGATCGTGCAACAACGAACGTAAATGGAGGTCTGGGCAACAATCAAAGGCGAGTTGCTACAGATTGTAAGTTGGAAGTTGTTAATGGCAATACAGGAGGAACTGGGGCTACCACATTTACAAGCCCTCATAGTCCCTCTGTGAACTCAGGTAAATCCCTTTCGATTAAGGAGTTTGTTTTTGGTTGTTTGGATCAGCCTCCAAACAGCAAAGTCAGGGGATCCCCAACTCATCCCAGTATTCAAAGAGGTAACTACAGTTTGACACCTAAGACTTCGTCGTCAAAGAGTGCCCCAACAAGCATTTTACCGAGTCCGACCGCTAGCCCACGAAGATCATATACTGGAGATCTTTTCGTTTCTGGTTTGCCTCGCCATGAATATCAGGAATCTCCTTTCAATAATTCTCCCAAATTTCCACCCCTTAAGACTCCACACACTTCTCAACCTTCTCCTCTCCATAGCCCGTCAGCTCGAAGTTTCGTAAGCGGTCCCAAATCTCCTAACGATGTGAAATTTCCGACGCATTCTAAGTTACAAAAAGATTGTAGTAGTACAGATCGGTCTGAAAACCTCGGTCATGTCAATGCTCATCCATTGCCACTTCCTCCTCCATTAGCACACTCTTCACAATCATCTCCACTGTCGCTTTCGTCGAGCGTTCATCGTGTTAATGAGAAGCCATACATTTCATCTACGAAAAGTCGGTGGCAAAAAGGAAAGCTCATTGGACGTGGTACTTTTGGAAGTGTTTATCTTGCAACCAACAGTGAAACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATGTGCTGAAAGTATAAAGCAACTAGAGCAGGAGATTAAAGTTCTCAGTCAACTTAAGCATCCAAATATTGTGCAGTATTATGGAAGCGAAATAATCGATGATCATTTCTATATATATTTGGAGTATGTTTATCCCGGGTCGATAAATAAATACGTTCGTGAACGTTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATCCACAGGGATATCAAAGGTGCAAACTTGCTAGTTGACTCGTCAGGAGTCGTCAAACTTGCAGATTTCGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGTACTGGATGGCTCCGGAGGTCATGAAGGCTGCTATGTTGAAAGATGCCAACCCTAATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGGATGGAAAACCTCCGTGGAGTGAGTTTGAAGGGCATCAAGCCATGTTCAAGGTGTTGAATAAAACCCCACCGATCCCGGAAAAGCTATCTCCAGAAGGGAAAGACTTCCTCCAGTGCTGCTTTCAAAGGAATCCAGCTGACAGACCAACAGCCATGGCGCTCCTTGACCATCCATTCTTAAGATCCTCAAATGACTCGAATGTTTCAACCCCCACGTCTGCATTTTCGACAATGAACCGCATGGAAAAACTCTTGAGTCCGAAGGACCACCGTAGTCCCAAAGGGGATCAGGCGCAAAACTCTTCTGGAACTTTGGCTGAAAATGGTTATCTGTCGTGCCCCCTTCAACGAACATTTCAAGCAATATTCCTGCCAGTGCCGTTAACAACCATCCCTTCGCTATTTCAAGGACTCATAAAAGGGAAGTGCCTCACCTCTGAGCTACAGTTGTGGATATTTACAGGCAAATACTCGACCGAGGAAGTTAGCCACCCTCTGCAGAAGGCCACAGGAGCTGGGATAGAGATCATCTTTCCCTCTGCCTGTTTTAACGACAAAACTCATTCTTTCTTGAACAAACTCTCATAG 2283 45.9 MPFFHKSASNSRLQQKAADSNFSVVQTESLVQRRLTRQRKLRHLTDREIGVELPRSFPDSPDLSAKPRSPLGGSERWSSPALPQPLPLPELFPVRNPESDSWFSGQGRVVSPIETPVRNSAIKTVRKSSDRATTNVNGGLGNNQRRVATDCKLEVVNGNTGGTGATTFTSPHSPSVNSGKSLSIKEFVFGCLDQPPNSKVRGSPTHPSIQRGNYSLTPKTSSSKSAPTSILPSPTASPRRSYTGDLFVSGLPRHEYQESPFNNSPKFPPLKTPHTSQPSPLHSPSARSFVSGPKSPNDVKFPTHSKLQKDCSSTDRSENLGHVNAHPLPLPPPLAHSSQSSPLSLSSSVHRVNEKPYISSTKSRWQKGKLIGRGTFGSVYLATNSETGALCAMKEVDLIPDDPKCAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIDDHFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVMKAAMLKDANPNLALAVDIWSLGCTIIEMLDGKPPWSEFEGHQAMFKVLNKTPPIPEKLSPEGKDFLQCCFQRNPADRPTAMALLDHPFLRSSNDSNVSTPTSAFSTMNRMEKLLSPKDHRSPKGDQAQNSSGTLAENGYLSCPLQRTFQAIFLPVPLTTIPSLFQGLIKGKCLTSELQLWIFTGKYSTEEVSHPLQKATGAGIEIIFPSACFNDKTHSFLNKLS 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 895707 899418 - CmoCh05G002050.1 Cmo05g00205 382340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00205 760 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 675 - -
Cmo05g00205 760 PANTHER - 1 675 - -
Cmo05g00205 760 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Cmo05g00205 760 SMART serkin_6 365 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g00205 760 MobiDBLite consensus disorder prediction 7 21 - -
Cmo05g00205 760 MobiDBLite consensus disorder prediction 52 84 - -
Cmo05g00205 760 Gene3D Transferase(Phosphotransferase) domain 1 361 665 - -
Cmo05g00205 760 ProSiteProfiles Protein kinase domain profile. 365 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g00205 760 MobiDBLite consensus disorder prediction 1 21 - -
Cmo05g00205 760 SUPERFAMILY Protein kinase-like (PK-like) 361 642 IPR011009 -
Cmo05g00205 760 Pfam Protein kinase domain 366 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g00205 760 MobiDBLite consensus disorder prediction 195 344 - -
Cmo05g00205 760 MobiDBLite consensus disorder prediction 256 292 - -
Cmo05g00205 760 MobiDBLite consensus disorder prediction 198 242 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00205 Cmo12g00455 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01003 Cmo-Chr3:7544064 Cmo05g00205 Cmo-Chr5:895707 6.04E-157 dispersed
Cmo05g00205 Cmo-Chr5:895707 Cmo16g00126 Cmo-Chr16:566206 5.17E-109 dispersed
Cmo12g00455 Cmo-Chr12:2785245 Cmo05g00205 Cmo-Chr5:895707 0 wgd
Cmo05g00205 Cmo-Chr5:895707 Cmo07g00734 Cmo-Chr7:3325183 1.84E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74341 PF00069 Pkinase 2.80E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00205 - - cmo:103487921 1031.94