Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00223 ATGTCGGTAACATCCATAACCCTCCCTTGTCCTCAACCCCACTCGCGATTCCCGTCGCAGAAGAAGCCTCTCAGATCTCGTTCTAACCTGGGGTTTCCTTCCCGACGCCTGATCTACGCCGCCGACGGGGTCTCCTCCTCCTCTTCTTCCTCGCCCCCATCCTCCGTTCAATTGCCGCAGCGGATTGCTCCGACTCCGGAACCGACGAAGCTTCCCTTGAGGAAGATTCCAGGCGACTATGGCCCGCCGATGTTCGGAGCGTTGAAGGACCGACAAGACTATTTCTACAATCAGGGGAGAGAAGAGTATCTCAAATCTCGGATGCTTCGCTACGAATCCACTGTTTACAGAACCAATATGCCGCCGGGTCCATTTATCACCAACGATTCACGAGTTGTGGTTTTACTCGACGGCAAGAGCTTCCCTGTTCTCTTCGACAATGCTAAAGTTGAGAAGAAGGATCTCTTCACCGGCACTTACATGCCTTACACAGAACTCACCGGCGGCTACAGAGTTCTCTCTTATATTGACCCATCTGAGCCCGATCACGAGAAGCTTAAACAGCTCATCTTCTTCCTCCTCAAGCACCGCCGTGATAAAATTCTCCCCGAATTTCACTCTACTTTTTCCGAGCTATTCCAGACTCTGGAGAAGGATTTAGCTGCCGTCGGCAGAGCAGAGTACAATGCTCCCGGTGAACAAGCGGCGTTTAATTTCTTGGCTCGGTCCCTCTTCGGCGCTAATCCTGTCGATACCAAATTGGGTCGAGATGCTCCGAAATTGATTGCGAAATGGGTTCTGTTCCAGCTCGGCCCTGTTCTTAGGCTCGGCCTCCCTAAGGTCGTCGAGGAGCTCCTCCTCCGCACGGTCCGGCTTCCACCGTCGCTGATTAAAGCCGATTACCGGCGGCTGTACGACTTCTTTTACCAATCCTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTCTTCACCACGTGTTTCAATTCATTCGGAGGGATGAAGATTTTCTTCCCCAATATGATTAAATGGATCGGACGTGCCGGAGCGAATCTCCACACCCAATTAGCAAGGGAGATTCGTACCGCCGTACAAGCCAACGGCGGCAGAATCACGATGGGGGCCATGGAACAGATGCCGCTGATGAAATCCGTAGTGTACGAAGCATTCAGAATCGAGCCGCCGGTTCCGGTTCAATACGGTCGGGCGAAGAAGGACCTAGTGGTCGAAAGCCACGACGCTGCTTTCGAGATCAAAGAAGGAGAAATGATTTGTGGGTTCCAACCATTCGCAACCAGAGACCCGAAAATCTTCGACAGAGCCAACGAGTTCGTGCCTGATCGGTTCACCGGCGACGGTGAGAGGTTGCTGAAGCACGTGCTATGGTCAAACGGACCGGAGACTCAATCGCCGACGGTTCAGAACAAGCAGTGCGCGGGAAAAGACTTCATCGTGTTCATCTCTCGCCTTTTCGTCGTCGAATTCTTCCTCCGATACGACTCCTTCGACATCGAAGTCGCAAACTCTCCGTTGGGCGCCGCCATCACTGTAACTTCCCTGAAAAAAGCAAGTTTCTAG 1611 52.82 MSVTSITLPCPQPHSRFPSQKKPLRSRSNLGFPSRRLIYAADGVSSSSSSSPPSSVQLPQRIAPTPEPTKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITNDSRVVVLLDGKSFPVLFDNAKVEKKDLFTGTYMPYTELTGGYRVLSYIDPSEPDHEKLKQLIFFLLKHRRDKILPEFHSTFSELFQTLEKDLAAVGRAEYNAPGEQAAFNFLARSLFGANPVDTKLGRDAPKLIAKWVLFQLGPVLRLGLPKVVEELLLRTVRLPPSLIKADYRRLYDFFYQSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGANLHTQLAREIRTAVQANGGRITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEMICGFQPFATRDPKIFDRANEFVPDRFTGDGERLLKHVLWSNGPETQSPTVQNKQCAGKDFIVFISRLFVVEFFLRYDSFDIEVANSPLGAAITVTSLKKASF 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 953094 954704 - CmoCh05G002230.1 Cmo05g00223 382358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00223 536 Pfam Cytochrome P450 365 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00223 536 PANTHER CYTOCHROME P450 26 52 534 - -
Cmo05g00223 536 MobiDBLite consensus disorder prediction 1 30 - -
Cmo05g00223 536 Gene3D Cytochrome P450 67 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00223 536 MobiDBLite consensus disorder prediction 42 75 - -
Cmo05g00223 536 MobiDBLite consensus disorder prediction 42 62 - -
Cmo05g00223 536 PRINTS E-class P450 group IV signature 390 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00223 536 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00223 536 PRINTS E-class P450 group IV signature 489 507 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00223 536 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 52 534 - -
Cmo05g00223 536 SUPERFAMILY Cytochrome P450 72 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00223 Cmo-Chr5:953094 Cmo19g00654 Cmo-Chr19:7035716 2.19E-178 dispersed
Cmo05g00223 Cmo-Chr5:953094 Cmo11g01328 Cmo-Chr11:9170165 1.03E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00223 K01723 - csv:101221732 952.199