Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00234 | ATGACCTCCGACGGCGCCACTTCTGCCACCATTAGCCGGCGGAAGCCGTCCTGGAGGGAGCGGGAGAATAATCGGACCAGAGAACGACGAAGGAGAGCCATCGCGGCTAAGATCTACGCTGGCCTTAGGGCTCAAGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGCTGATGCTGGTTGGACCGTCGAAGACGACGGAACCACCTATCGGAAGGGATGCAGGCCGCCCCCAATCGATATCGTCGGCAGTTCCACCAGAGCCACCCCCTACACATCTCAAAATCCAAGCCCATTGTCTTCTTCATTTCCTAGTCCAATGGCATCCTATCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTTGGACGCCAACCATCCATCAAACCTCATTCCATATCTTCGCCAAGCGATTCCCAAATCACTTCCTGGTCTTAGAATCTCAAACAGTGCTCCCGTGACGCCTCCTCTTTCATCCCCTGCCTCAAATTGGGAGGTCACGGCTAAAGAATCCTTGTCCTTGTTGAATTACCCTTTCTTTGCAGTATCCGCCCCAGCTAGCCCGACACGCCCTCAGCTGCTGCATACTCCCGCCACGATCCACGAATGCGATGAGTCTGAATCATCCACCAATGACTCCAATCAGTGGGCACTTCTCCGTGCCTGTGCACCAACTTCTCCCACCTTCAACCTTATGAAATCTGCTGATCAGCATGCTCTGCACGGTGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTGTAAGGTTAAGCCCTGGGAAGGGGAGAAGATCCATGAAGTTGGATTGGAGGATTTAGAGCTCACACTTGGTAGCGGTAAGGCTCAAAATGATAACAACAGTAAGAAACCTTGTTTTGATTGA | 930 | 51.72 | MTSDGATSATISRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCRPPPIDIVGSSTRATPYTSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRLDANHPSNLIPYLRQAIPKSLPGLRISNSAPVTPPLSSPASNWEVTAKESLSLLNYPFFAVSAPASPTRPQLLHTPATIHECDESESSTNDSNQWALLRACAPTSPTFNLMKSADQHALHGGFIKENGRGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSGKAQNDNNSKKPCFD | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1002966 | 1004658 | + | CmoCh05G002340.1 | Cmo05g00234 | 382369 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00234 | 309 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
Cmo05g00234 | 309 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 298 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cmo05g00234 | 309 | PANTHER | PROTEIN BRASSINAZOLE-RESISTANT 1 | 1 | 298 | - | - | |
Cmo05g00234 | 309 | MobiDBLite | consensus disorder prediction | 93 | 133 | - | - | |
Cmo05g00234 | 309 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 12 | 136 | IPR008540 | - | |
Cmo05g00234 | 309 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Cmo05g00234 | 309 | MobiDBLite | consensus disorder prediction | 82 | 133 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g00234 | Cmo12g00435 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00806 | Cmo-Chr3:6530547 | Cmo05g00234 | Cmo-Chr5:1002966 | 4.86E-90 | dispersed | |
Cmo05g00234 | Cmo-Chr5:1002966 | Cmo07g00506 | Cmo-Chr7:2298841 | 1.45E-90 | dispersed | |
Cmo12g00435 | Cmo-Chr12:2676074 | Cmo05g00234 | Cmo-Chr5:1002966 | 1.13E-158 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
9792 | PF05687 | BES1_N | 2.20E-61 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00234 | K14503 | - | csv:101219853 | 468.003 |