Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00234 ATGACCTCCGACGGCGCCACTTCTGCCACCATTAGCCGGCGGAAGCCGTCCTGGAGGGAGCGGGAGAATAATCGGACCAGAGAACGACGAAGGAGAGCCATCGCGGCTAAGATCTACGCTGGCCTTAGGGCTCAAGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGCTGATGCTGGTTGGACCGTCGAAGACGACGGAACCACCTATCGGAAGGGATGCAGGCCGCCCCCAATCGATATCGTCGGCAGTTCCACCAGAGCCACCCCCTACACATCTCAAAATCCAAGCCCATTGTCTTCTTCATTTCCTAGTCCAATGGCATCCTATCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTTGGACGCCAACCATCCATCAAACCTCATTCCATATCTTCGCCAAGCGATTCCCAAATCACTTCCTGGTCTTAGAATCTCAAACAGTGCTCCCGTGACGCCTCCTCTTTCATCCCCTGCCTCAAATTGGGAGGTCACGGCTAAAGAATCCTTGTCCTTGTTGAATTACCCTTTCTTTGCAGTATCCGCCCCAGCTAGCCCGACACGCCCTCAGCTGCTGCATACTCCCGCCACGATCCACGAATGCGATGAGTCTGAATCATCCACCAATGACTCCAATCAGTGGGCACTTCTCCGTGCCTGTGCACCAACTTCTCCCACCTTCAACCTTATGAAATCTGCTGATCAGCATGCTCTGCACGGTGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTGTAAGGTTAAGCCCTGGGAAGGGGAGAAGATCCATGAAGTTGGATTGGAGGATTTAGAGCTCACACTTGGTAGCGGTAAGGCTCAAAATGATAACAACAGTAAGAAACCTTGTTTTGATTGA 930 51.72 MTSDGATSATISRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCRPPPIDIVGSSTRATPYTSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRLDANHPSNLIPYLRQAIPKSLPGLRISNSAPVTPPLSSPASNWEVTAKESLSLLNYPFFAVSAPASPTRPQLLHTPATIHECDESESSTNDSNQWALLRACAPTSPTFNLMKSADQHALHGGFIKENGRGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSGKAQNDNNSKKPCFD 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1002966 1004658 + CmoCh05G002340.1 Cmo05g00234 382369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00234 309 MobiDBLite consensus disorder prediction 14 29 - -
Cmo05g00234 309 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 298 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cmo05g00234 309 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 298 - -
Cmo05g00234 309 MobiDBLite consensus disorder prediction 93 133 - -
Cmo05g00234 309 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 136 IPR008540 -
Cmo05g00234 309 MobiDBLite consensus disorder prediction 1 29 - -
Cmo05g00234 309 MobiDBLite consensus disorder prediction 82 133 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00234 Cmo12g00435 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00806 Cmo-Chr3:6530547 Cmo05g00234 Cmo-Chr5:1002966 4.86E-90 dispersed
Cmo05g00234 Cmo-Chr5:1002966 Cmo07g00506 Cmo-Chr7:2298841 1.45E-90 dispersed
Cmo12g00435 Cmo-Chr12:2676074 Cmo05g00234 Cmo-Chr5:1002966 1.13E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9792 PF05687 BES1_N 2.20E-61 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00234 K14503 - csv:101219853 468.003