Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00351 ATGGCTGGTTCTTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTACAGAGATTCTGGTCGGAGGCAAACCCAATGCCTGGAAACTCCCATCTTCCCAATCTCAGTCGCTCAATCAATGGGCCGAAACCTCCCGCTTTCGCGTCGGCGACACTCTCGCGTGGAGCTACGAAGAAGGAAAAGATTCGGTACTGAAAGTGGGAAAGGAAGATTACGAAGCCTGCAACACCCAAAACCCAGAACAGAGGTTCGAGGATGGGAACACCAAGGTCGAGCTACACAAACCAGGCCCATTCTACTTCATCAGTGGCGCAAAGGGTCACTGCGAACAGGGTCAGAAGCTGGTCGTCGTCGTTGTGACTCCTCGCCGGAGATTCGTCAGCTTCTCCCCGGCGCCTTCTCCGACCGAGATTGAGGGTCCCGCGGTTGCTCCGTCGAGTGGTGCGGCGAGTTTTAATGTTGGGTTTTTAGCGGCGGCCGTCGGAATCTTGGGTCTTGGAGTTGGTTTCCTCTGA 531 54.61 MAGSSRALFLLTFLLFSFSEATEILVGGKPNAWKLPSSQSQSLNQWAETSRFRVGDTLAWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVELHKPGPFYFISGAKGHCEQGQKLVVVVVTPRRRFVSFSPAPSPTEIEGPAVAPSSGAASFNVGFLAAAVGILGLGVGFL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1574445 1575787 - CmoCh05G003510.1 Cmo05g00351 382486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00351 176 PANTHER BLUE COPPER PROTEIN 9 172 IPR039391 GO:0009055
Cmo05g00351 176 CDD OsENODL1_like 22 120 IPR041846 -
Cmo05g00351 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Cmo05g00351 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cmo05g00351 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Cmo05g00351 176 Gene3D - 20 128 IPR008972 -
Cmo05g00351 176 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 172 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00351 Cmo12g00319 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00351 Cmo-Chr5:1574445 Cmo16g00907 Cmo-Chr16:5419212 1.44E-33 dispersed
Cmo12g00319 Cmo-Chr12:1988556 Cmo05g00351 Cmo-Chr5:1574445 4.50E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00351 - - csv:101210664 247.284