Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00437 ATGGAGGAGATGTCCTCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAGCAACCCCCATGGATATCACAAGACTTAAGCTCATGGCAGATACTGCCGGTTTGTTATCCGACTCTGTGACGAAGGCTTCGGATGACTCGATTGAAGTAGTTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGATTGGTATTGCTGCTGTTTCGGTTACGAATGATGATAAGTGCGAAAGCGTTCCGTTATCGGTTGTGTTATCTCAAAGTAGTAGCAATTGGGTTGCGGCGGATGAGACGATATCGGTTGGATGTGAAGAAGATGATTGTTTATCTTTAGAGGGTGAACAGATTTATGATAGTTCTTGTTCACATTCAGTGGTTAGTGAAACTAGCAGCATTTGTGGTGATGATTTTTTAGGTACTGAGGTGTCATTTTTCGAAGCGTTTGATTCGATTACCAATGCGAAGGACGTTAGTTGTGTCGAGATTGCAGCGAAAGGTAATATTGCGAGTTCTTCTTCTGCAGTTGTTAGCCTTGAAGATGATGTTGGAGCATGTAATAACGTGGTTCTTCAGCTGCCTATTGAGGAAAGGGCGAACGAACCGGTTAGTCGAAGCGTTTTCGAGGTAGATTGTGTACCCCTTTGGGGATTTACGTCGGTATGTGGAAGAAGACCCGAGATGGAAGATGCTGTAGCAATGGTACCTAAGTTTTCAGAACTTCCCGTCGAAATGCTTGTTGGTGACCGAGTTTTCGATGGCTCGAGCAAGGCTATAGCTCATCAAACCGTTCATTTTTTCGGGGTTTACGATGGTCATGGTGGCTCTCAGGTCGCTAATTATTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATTGAACTTGCTAAGCAAGATATAGCTGCTGGTAATATAAAGGATGATTGTCAAGAGCTATGGAGAAAGGCATTCACCAAATGCTTTGTAAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTGGCACCAGAAACTGTTGGCTCCACTGCTGTTGTTGCCATTATCTGTGCATCTCATATCATTGTTGCAAATTGTGGCGACTCGAGAGCCGTTCTTTGTCGTCGGAAGGAGCCGATGGCATTGTCCGTGGATCACAAACCGAACAGAGAAGATGAATATGAACGGATTGAAGCTGCAGGTGGGAAAGTCATACAGTGGAACGGGCACCGTGTTTTTGGTGTTCTAGCGATGTCGAGATCGATCGGTGATAGATACTTGAAACCATGGATCATCCCGGAGCCAGAAGTGATGTTCATCCCTCGAGCGAAAGATGACGAATGTCTCGTTCTAGCCAGCGATGGTTTATGGGACGTGATGTCAAACGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTTCTCTGGCACAAGAAGAACGGTGTCAGTTTACCTTCTGAGAGAGGGGTGGGGATTGATCCTGCAGCCCAAGCAGCCGCGGAATATCTCTCGAAACGAGCTCTTCAAAAGGGCAGCAAAGACAACATCACGATCGTCGTGATCGATTTGAAAGCTCATTGGAAGTTCAAGACGAAATCATAA 1614 45.91 MEEMSSAVVVPFRVGNSVCDNPNMAATPMDITRLKLMADTAGLLSDSVTKASDDSIEVVSDDCKSSNGEEEIGIAAVSVTNDDKCESVPLSVVLSQSSSNWVAADETISVGCEEDDCLSLEGEQIYDSSCSHSVVSETSSICGDDFLGTEVSFFEAFDSITNAKDVSCVEIAAKGNIASSSSAVVSLEDDVGACNNVVLQLPIEERANEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVAMVPKFSELPVEMLVGDRVFDGSSKAIAHQTVHFFGVYDGHGGSQVANYCRERMHLALSEEIELAKQDIAAGNIKDDCQELWRKAFTKCFVKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRRKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAKDDECLVLASDGLWDVMSNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSKRALQKGSKDNITIVVIDLKAHWKFKTKS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2039564 2042780 - CmoCh05G004370.1 Cmo05g00437 382572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00437 537 SMART PP2C_4 213 525 IPR001932 -
Cmo05g00437 537 Gene3D - 210 537 IPR036457 -
Cmo05g00437 537 PANTHER ALPHABET, ISOFORM E-RELATED 139 536 - -
Cmo05g00437 537 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 139 536 - -
Cmo05g00437 537 CDD PP2Cc 225 527 IPR001932 -
Cmo05g00437 537 SUPERFAMILY PP2C-like 218 528 IPR036457 -
Cmo05g00437 537 ProSitePatterns PPM-type phosphatase domain signature. 274 282 IPR000222 GO:0043169
Cmo05g00437 537 Pfam Protein phosphatase 2C 229 520 IPR001932 -
Cmo05g00437 537 ProSiteProfiles PPM-type phosphatase domain profile. 223 527 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00437 Cmo12g00591 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00060 Cmo-Chr1:218493 Cmo05g00437 Cmo-Chr5:2039564 5.01E-178 dispersed
Cmo02g01826 Cmo-Chr2:10328967 Cmo05g00437 Cmo-Chr5:2039564 4.62E-20 dispersed
Cmo05g00437 Cmo-Chr5:2039564 Cmo14g01289 Cmo-Chr14:10793271 1.14E-156 dispersed
Cmo12g00591 Cmo-Chr12:3625701 Cmo05g00437 Cmo-Chr5:2039564 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00437 K14497 - csv:101207918 909.057