Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00474 ATGTCTTCCGCCGAGAAGGAGAGAGAGACTCAGGTCTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTATGACGGTACGCTCCATCACTTTGTGCTTCTTCTTCTTCCTTTTTTCTCTGATTTTTGTTGTATTGTTATTTTCCTTCCATTGAGGTGCGATTTTATGATGATATTGTTAATGATCTGTTGTTTTGTTCCGGATTATGATCTGTGTTGGCAAGTGTGGACGACGGGAGTTGAAATGCTGATTCATTTCTACCTCTTGCTTGCGTTTGAGAAATGGAAGTTATCAATTATTGGATCTTACTGTAGCCTTCGCGATCGCTGTCTTTTCTTTACGGAGTTTGATCGATCCAATGATGCAGAAATGGTTGAGTATATGAAGAATATTGCAAAGCTTGACCTCGAACTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTGATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAGAAAGTTGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTCTATCATAGACAAGCATCTAATCCCTCATTCGTCTGCTGCAGAAGCCACTGTCTTCTACTACAAGATGAAAGGTGATTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAGTCTTTCACATTAGAAATACATAAGAACAATGGCACTGCGAATACCGAACTCCCATCGACCCACCCAATCCGTCTTGGTCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCGTACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACACTCTGGACCTCAGATTTGCCTGAAGATGGCGGTATATCTCATAATTTATACTCAAGAACGCCGCCCAGCAAGCGAAATGAGAAAGCGAGCCCCTCCGCAGCTCATCTAGAGACCGGACTTGTTGCCCTAAGAGAATCTAAAGATAGCCCTTCTACAGTGTTGTGGGATTTGTGGAGTGCACAATAA 1179 43.34 MSSAEKERETQVYMAKLAEQAERYDGTLHHFVLLLLPFFSDFCCIVIFLPLRCDFMMILLMICCFVPDYDLCWQVWTTGVEMLIHFYLLLAFEKWKLSIIGSYCSLRDRCLFFTEFDRSNDAEMVEYMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELSKICGDILSIIDKHLIPHSSAAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSFTLEIHKNNGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGISHNLYSRTPPSKRNEKASPSAAHLETGLVALRESKDSPSTVLWDLWSAQ 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2214382 2217442 + CmoCh05G004740.1 Cmo05g00474 382609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00474 392 ProSitePatterns 14-3-3 proteins signature 2. 316 335 IPR023409 -
Cmo05g00474 392 SMART 1433_4 107 347 IPR023410 -
Cmo05g00474 392 PANTHER BNAC03G57490D PROTEIN 4 26 - -
Cmo05g00474 392 PANTHER BNAC03G57490D PROTEIN 122 343 - -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 186 210 IPR000308 -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 137 166 IPR000308 -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 217 239 IPR000308 -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 280 306 IPR000308 -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 307 336 IPR000308 -
Cmo05g00474 392 PRINTS 14-3-3 protein zeta signature 253 279 IPR000308 -
Cmo05g00474 392 SUPERFAMILY 14-3-3 protein 120 336 IPR036815 -
Cmo05g00474 392 MobiDBLite consensus disorder prediction 343 363 - -
Cmo05g00474 392 Pfam 14-3-3 protein 121 334 IPR023410 -
Cmo05g00474 392 PANTHER 14-3-3 PROTEIN 4 26 IPR000308 -
Cmo05g00474 392 PANTHER 14-3-3 PROTEIN 122 343 IPR000308 -
Cmo05g00474 392 ProSitePatterns 14-3-3 proteins signature 1. 143 153 IPR023409 -
Cmo05g00474 392 Gene3D - 1 343 IPR036815 -
Cmo05g00474 392 Coils Coil 294 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00474 Cmo-Chr5:2214382 Cmo19g01060 Cmo-Chr19:9198427 1.63E-121 dispersed
Cmo12g00080 Cmo-Chr12:434239 Cmo05g00474 Cmo-Chr5:2214382 7.72E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00474 - K06630 csv:101221858 404.06