Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00477 ATGCCGAGCATTTCGGCCCTCTATTCCATAGAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTGTATGATTTGACGTCATATTTGGATGAGCATCCTGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGATGCTCGAGAGCTGATGGAGAAGTTCTATATCGGCGAGCTTGATCCTTCTTCCTCAGCGATCCCAGAACTCGAAGCAAAAGAACCAGATGGTTATGCAGCTCGGGTTCAGACCTTGACAAAGCAATACTGGGGGATTCCTATTGCAGTACTTGGTATTTCTGTAGTACTTGGCTGGTTATACTTGCTCAAAAAGTGA 396 45.71 MPSISALYSIEEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGELDPSSSAIPELEAKEPDGYAARVQTLTKQYWGIPIAVLGISVVLGWLYLLKK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2225434 2227615 + CmoCh05G004770.1 Cmo05g00477 382612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00477 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Cmo05g00477 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 85 IPR036400 -
Cmo05g00477 131 PANTHER CYTOCHROME B5 3 129 - -
Cmo05g00477 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cmo05g00477 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cmo05g00477 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cmo05g00477 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cmo05g00477 131 PANTHER CYTOCHROME B5 ISOFORM A 3 129 - -
Cmo05g00477 131 Gene3D - 5 89 IPR036400 -
Cmo05g00477 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cmo05g00477 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cmo05g00477 131 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00477 Cmo-Chr5:2225434 Cmo14g01941 Cmo-Chr14:14367871 8.56E-39 dispersed
Cmo19g00182 Cmo-Chr19:1180756 Cmo05g00477 Cmo-Chr5:2225434 2.78E-19 dispersed
Cmo05g00477 Cmo-Chr5:2225434 Cmo06g01256 Cmo-Chr6:9487661 6.79E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00477 K23490 - csv:101220127 228.794