Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00477 | ATGCCGAGCATTTCGGCCCTCTATTCCATAGAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTGTATGATTTGACGTCATATTTGGATGAGCATCCTGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGATGCTCGAGAGCTGATGGAGAAGTTCTATATCGGCGAGCTTGATCCTTCTTCCTCAGCGATCCCAGAACTCGAAGCAAAAGAACCAGATGGTTATGCAGCTCGGGTTCAGACCTTGACAAAGCAATACTGGGGGATTCCTATTGCAGTACTTGGTATTTCTGTAGTACTTGGCTGGTTATACTTGCTCAAAAAGTGA | 396 | 45.71 | MPSISALYSIEEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGELDPSSSAIPELEAKEPDGYAARVQTLTKQYWGIPIAVLGISVVLGWLYLLKK | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2225434 | 2227615 | + | CmoCh05G004770.1 | Cmo05g00477 | 382612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00477 | 131 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 10 | 80 | IPR001199 | - | |
Cmo05g00477 | 131 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 5 | 85 | IPR036400 | - | |
Cmo05g00477 | 131 | PANTHER | CYTOCHROME B5 | 3 | 129 | - | - | |
Cmo05g00477 | 131 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cmo05g00477 | 131 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cmo05g00477 | 131 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cmo05g00477 | 131 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Cmo05g00477 | 131 | PANTHER | CYTOCHROME B5 ISOFORM A | 3 | 129 | - | - | |
Cmo05g00477 | 131 | Gene3D | - | 5 | 89 | IPR036400 | - | |
Cmo05g00477 | 131 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
Cmo05g00477 | 131 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Cmo05g00477 | 131 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00477 | Cmo-Chr5:2225434 | Cmo14g01941 | Cmo-Chr14:14367871 | 8.56E-39 | dispersed | |
Cmo19g00182 | Cmo-Chr19:1180756 | Cmo05g00477 | Cmo-Chr5:2225434 | 2.78E-19 | dispersed | |
Cmo05g00477 | Cmo-Chr5:2225434 | Cmo06g01256 | Cmo-Chr6:9487661 | 6.79E-40 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00477 | K23490 | - | csv:101220127 | 228.794 |