Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00479 ATGTCATCACAAGCTCTCAACGCCCTCCTTCTCCACTTCCCCATTTCCATTACCCAAAGCTTCGAAGCTCTTCTTCTCAGCTTTCTTCTCGTCTCCATTTTCGCCTTCCTCCTCCACCCCGGCGGCCTCGCCTGGGCCATTTCCAAGTCCAAAACCACCGCCTCCGCCGCCATTCCCGGCCCTTCCGGCCTCCCATTCATCGGATTACTCCATGTCTTCACCCATTCAACCCCTCACAGAGCTCTCTCCGCCCTTGCCAATCGATTCAAAGCATACCCTTTAATGGCCTTCTCCGTTGGCCTTACAAGGTTCGTCATTTCTAGCAATCCTGATATTGCAAAGGAGATTCTAAACAGCCCATCCTTTGCTGATAGACCTGTAAAGGAGTCCGCTTATGAGCTGCTCTTCCACAGAGCAATGGGTTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGGAGAATTTCAGCTACTTACATGTTTAATCCAAAGAGAATTGCTGGTTTTGAAGGGTTTAGGAGGGAAATTGGAGCTAAAATGATGAGGGAAATAGAGAAATCCATGGCTTTAAAAGGGGAAGTGAGAGTTAAAGAGATTCTTCATTTTGGGTCTTTGAATAACGTAATGATGACTGTTTTTGGTAAGTGTTATGAGTTTAATGGTGAAGGAAATGGGGCAGAGCTTGAGGAATTAGTAAGGGAAGGGTATGATCTTCTTGGGATATTCAATTGGAGTGACCATTTTCCCTTCTTGGGGTTCTTGGATTTACAAGGCGTGAGGAAAAGGTGTAGAGTTTTGGCTTCTAAGGTCAATATATTTGTCGGAAAAATCATTGAAGAACATAGAACAAAGAGGAAAGAACAAGAACAAAACAGAGATTTTGTCGATGTTCTGCTTGATTTGGAGAATGATGACAAGCTATCAGATTCCGACATGATTGCTGTTCTTTGGGAAATGATCTTTAGAGGGACCGACACAGTGGCGATACTTCTGGAGTGGATTTTAGCTCGAATGGTAAAACACCCAGAAATCCAAATGAAAGCCCAAGACGAAATCGATTCATTAATAGGCAAAAGCTCTCGACCCATTACAGATTCCGACATCCAAAATCTTCCATATCTTCAAGCCATTGTTAAAGAATGTCTTAGAATGCACCCACCAGGGCCACTTCTGTCATGGGCTCGACTAGCGACCGCCGACGTTCATGTCGGCGGTCGTGTGATACCGGCGGGGACGACGGCGATGGTGAACATGTGGGCGATAACCCACAACGAGAGGGTTTGGTTAGAGCCAGAGAAATTCGAGCCAAATCGGTTCATGGAAGAGGAAATTAGTGTAATGGGGAGTGATTTGAGGTTGGCTCCATTTGGGGCAGGGCGAAGGGTTTGTCCGGGAAAGGCCATGGGTTTAGCCACCGTGCAGCTCTGGTTGGCTCAGCTGCTTCGAGCTTACAAATGGGTGGCGTGTTCTGAAGAAGCCGCCACTAATGGTGGCGTAGATTTGTCAGAGTGCCTTAAACTCTCTCTGGAAATGGAATCTCCTCTGGTTTGTAGAGCCATTGGGAGGAGGGTTGGTTTGGCAGAGGAATGA 1590 46.67 MSSQALNALLLHFPISITQSFEALLLSFLLVSIFAFLLHPGGLAWAISKSKTTASAAIPGPSGLPFIGLLHVFTHSTPHRALSALANRFKAYPLMAFSVGLTRFVISSNPDIAKEILNSPSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFNPKRIAGFEGFRREIGAKMMREIEKSMALKGEVRVKEILHFGSLNNVMMTVFGKCYEFNGEGNGAELEELVREGYDLLGIFNWSDHFPFLGFLDLQGVRKRCRVLASKVNIFVGKIIEEHRTKRKEQEQNRDFVDVLLDLENDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVKHPEIQMKAQDEIDSLIGKSSRPITDSDIQNLPYLQAIVKECLRMHPPGPLLSWARLATADVHVGGRVIPAGTTAMVNMWAITHNERVWLEPEKFEPNRFMEEEISVMGSDLRLAPFGAGRRVCPGKAMGLATVQLWLAQLLRAYKWVACSEEAATNGGVDLSECLKLSLEMESPLVCRAIGRRVGLAEE 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2236593 2238786 - CmoCh05G004790.1 Cmo05g00479 382614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00479 529 Pfam Cytochrome P450 59 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 Gene3D Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Cmo05g00479 529 PANTHER CYTOCHROME P450 78A7-RELATED 9 521 - -
Cmo05g00479 529 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00479 529 PANTHER CYTOCHROME P450 78A5 9 521 - -
Cmo05g00479 529 SUPERFAMILY Cytochrome P450 58 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00479 Cmo-Chr5:2236593 Cmo13g01109 Cmo-Chr13:9082814 0 dispersed
Cmo05g00479 Cmo-Chr5:2236593 Cmo12g00085 Cmo-Chr12:453319 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00479 K20619 - csv:101221468 874.004