Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00505 | ATGGCGTTACAGAACATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAATGTAGTTAACATGGTGGACATTGCAAAAGCCTTGGGCAGACCTGCTGCTTACACTACCAAGTACTTCGGATGTGAGCTTGGCGCACAATCCAAGTTTGATGAGAAAACAGGGATTGCTCTTGTAAATGGAGCACATGAGACGGCGAAGTTGGCTGGTCTTCTCGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGAAACCCTGAAACTGAGATAATCATCACTAAGACGCAGATGATCAATATGAAATGTGCTGCTTGTGGATTCATATCTGATGTTGATATGAGAGATAAACTCACTACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCGAAAGACAAGAAAGCAATGAGGCGGGCTGAGAAGGAACGGCTTAAGGAAGGAGAGGCTGCTGATGAGGAACTGAAGAAAATAAAGAAGGATTCCCTGAAGAAGAAAAGCACTAGTGGTAATGCAAAGGAAGCTGTAACCAAAGTTCCAAGCAAGAAAAAGAGTAACGGCTCCGATGAGGATCATTCTCCAACTCGTAGCCATGCCGTTGAGAATGACCAAGCTGCTGACGACGACGACGACGACGATGTACAGTGGCAAACAGACACATCTTTGGAGGCAGCCAAGCAGCGTATTCAGGAGCAGTTGAGTGCTGTCACTGCTGATATGGTCATGCTCTCTACAACTGAAGAGACAAAGTCGTCAAAAAAGTCCCCCGAACACGAGAAGTCTGTGGTCAACGGAAGCAAGAATGGAAACGGAGTGTCTACCCATGGTGCCCTTGTTCATGAGATCAAAGATTATTTGAAGAAAAGTCCCTCTGCAGCCGATCTTAAATCATTCTTGGAGTCGCTTACTGGAACTCACCAAGAGACTGCGAATGCCTTAGTTGAGGCTCTATTTGAAGGAGTTGGGAAAGGGTTCTCAAAGGAGGTAGTGAAAAAGAAGAAGTTCCTGGTTGCAGTTGCAGCAGCTCAGGAGGAGGGATCACAGATAGTTCTGTTGCGTTCCATCGAATCTTTCTGTCTCAACACGTGTCCGGAGGTGGCTAAGGAGATCGCACTGGTCCTGAAATCGTTATACGATGGGGATGTAATAGAGGAGGAATTCGTGCTAGAGTGGTACCAGCAGGGACTGGCAGGAGCTAACAAAGGTAGCCAAATCTGGAAGCATGTAAAGCCGTTCATCGAGTGGCTCCAGAACGCAGAGTCGGAGACGGAAGAAGAGTAA | 1347 | 45.95 | MALQNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALGRPAAYTTKYFGCELGAQSKFDEKTGIALVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMINMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELKKIKKDSLKKKSTSGNAKEAVTKVPSKKKSNGSDEDHSPTRSHAVENDQAADDDDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTTEETKSSKKSPEHEKSVVNGSKNGNGVSTHGALVHEIKDYLKKSPSAADLKSFLESLTGTHQETANALVEALFEGVGKGFSKEVVKKKKFLVAVAAAQEEGSQIVLLRSIESFCLNTCPEVAKEIALVLKSLYDGDVIEEEFVLEWYQQGLAGANKGSQIWKHVKPFIEWLQNAESETEEE | 448 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2433298 | 2434644 | - | CmoCh05G005050.1 | Cmo05g00505 | 382640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00505 | 448 | ProSiteProfiles | W2 domain profile. | 275 | 448 | IPR003307 | GO:0005515 | |
Cmo05g00505 | 448 | Gene3D | - | 105 | 145 | - | - | |
Cmo05g00505 | 448 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 448 | IPR045196 | GO:0003743|GO:0006413 | |
Cmo05g00505 | 448 | Coils | Coil | 435 | 448 | - | - | |
Cmo05g00505 | 448 | MobiDBLite | consensus disorder prediction | 267 | 294 | - | - | |
Cmo05g00505 | 448 | Gene3D | - | 294 | 448 | - | - | |
Cmo05g00505 | 448 | CDD | W2_eIF5 | 295 | 446 | - | - | |
Cmo05g00505 | 448 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743|GO:0006413 | |
Cmo05g00505 | 448 | SMART | 542_3 | 356 | 444 | IPR003307 | GO:0005515 | |
Cmo05g00505 | 448 | MobiDBLite | consensus disorder prediction | 199 | 225 | - | - | |
Cmo05g00505 | 448 | MobiDBLite | consensus disorder prediction | 143 | 236 | - | - | |
Cmo05g00505 | 448 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 370 | 448 | IPR003307 | GO:0005515 | |
Cmo05g00505 | 448 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743|GO:0006413 | |
Cmo05g00505 | 448 | MobiDBLite | consensus disorder prediction | 148 | 190 | - | - | |
Cmo05g00505 | 448 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743|GO:0006413 | |
Cmo05g00505 | 448 | Gene3D | - | 2 | 104 | - | - | |
Cmo05g00505 | 448 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743|GO:0006413 | |
Cmo05g00505 | 448 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 1 | 448 | - | - | |
Cmo05g00505 | 448 | SUPERFAMILY | ARM repeat | 299 | 442 | IPR016024 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00505 | Cmo-Chr5:2433298 | Cmo13g00002 | Cmo-Chr13:35205 | 8.48E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00505 | K03262 | - | csv:101210873 | 722.235 |