Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00585 ATGGCCACCGCCGTGCCGGAAAATCTCTCTCGTGAGCAATATGTGTACCTAGCAAAGCTTGCCGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCTGTGGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCCTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAATGTTGAGACTGAGCTTTCCGAGGTCTGTGCGAGTATTTTGAAGCTTTTGGACTCGAATCTTATTCCCTCCGCCACTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCTGAGTTTAAGGTTGGGGATGAGAGGAAAACCGCTGCTGAGGATACTATGCTGGCTTATAAGGCTGCTCAGGATGTTGCAGCTGCAAATCTTGCACCCACTCATCCGATTAGGCTGGGGCTGGCACTCAATTTCTCTGTATTTTACTTCGAGATTCTGAATCAGTCCGACAAAGCTTGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTAGATACTTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAGCTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGACCAGTTAGACGAGTCATAG 759 48.35 MATAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSNVETELSEVCASILKLLDSNLIPSATASESKVFYLKMKGDYHRYLAEFKVGDERKTAAEDTMLAYKAAQDVAAANLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2895035 2898168 + CmoCh05G005850.1 Cmo05g00585 382720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00585 252 Coils Coil 17 37 - -
Cmo05g00585 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Cmo05g00585 252 PANTHER 14-3-3 PROTEIN 8 248 IPR000308 -
Cmo05g00585 252 PIRSF 14-3-3 6 252 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cmo05g00585 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cmo05g00585 252 PANTHER BNAC02G00320D PROTEIN 8 248 - -
Cmo05g00585 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cmo05g00585 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cmo05g00585 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cmo05g00585 252 SMART 1433_4 11 251 IPR023410 -
Cmo05g00585 252 Gene3D - 1 252 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00585 Cmo-Chr5:2895035 Cmo14g01165 Cmo-Chr14:9444790 3.41E-136 dispersed
Cmo05g00585 Cmo-Chr5:2895035 Cmo12g00144 Cmo-Chr12:908622 3.84E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00585 K06630 - csv:101222827 469.544