Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00587 ATGGTGGTTAGAAAAATCGGCATTTACGAGGTCGGAAGGACGATTGGAGAAGGTACTTTTGCAAAGGTGAAGTTCGCTCAGAACACTGAGACTGGTGAGAGTGTTGCTATGAAAATCCTCGACCGGAGCACCATTATCAAGCACAAGATGGTCGATCAGATAAAGAAGGAGATTTCTATCATGAAGCTTGTGAGGCACCCTTACGTTGTTCGTCTTCACGAGGTTCTTGCAAGCCGTACTAAGATTTATATAATCTCGGAGTACATTACTGGTGGTGAATTGTTTGACAAAATGGTTCATCATGGCCGGCTTAGTGAAGCTGAATCCAGGAAGTACTTCCAACAGCTAATTGATGGTGTAGATTATTGCCACAGCAAAGGAGTATACCACAGAGATTTAAAGGATATCTTCCATTTGATGAGCTTGATCTCACCACGCTATATAATCGAGAGAGCTGACTTTTCATGTCCATCTTGGTTCCCTGTGGGGGCAAAACCCTTGATCCAAAGAATATTTGACCCCAATCCTTCAACTCGTATTACCGTCGAACAGGATGTCTTTGATGATCCTGAGGCCCAGAAAGTGGATAAGCAAACACGCCGCCTCCCCACTCTCCCACCTCCATTTTTCCCTCTTCAATTTTTACACTCTAACAAGGCCCCATCGGCCTCCACTTCTTCAATTTCTTCACAGTCGATTAAAGTGGATCTCTAA 714 44.12 MVVRKIGIYEVGRTIGEGTFAKVKFAQNTETGESVAMKILDRSTIIKHKMVDQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIISEYITGGELFDKMVHHGRLSEAESRKYFQQLIDGVDYCHSKGVYHRDLKDIFHLMSLISPRYIIERADFSCPSWFPVGAKPLIQRIFDPNPSTRITVEQDVFDDPEAQKVDKQTRRLPTLPPPFFPLQFLHSNKAPSASTSSISSQSIKVDL 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2901096 2905911 - CmoCh05G005870.1 Cmo05g00587 382722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00587 237 PANTHER SERINE/THREONINE KINASE 6 134 - -
Cmo05g00587 237 PANTHER SERINE/THREONINE KINASE 148 205 - -
Cmo05g00587 237 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Cmo05g00587 237 SUPERFAMILY Protein kinase-like (PK-like) 5 223 IPR011009 -
Cmo05g00587 237 Gene3D Transferase(Phosphotransferase) domain 1 89 155 - -
Cmo05g00587 237 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 8 6 134 - -
Cmo05g00587 237 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 8 148 205 - -
Cmo05g00587 237 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Cmo05g00587 237 ProSiteProfiles Protein kinase domain profile. 9 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g00587 237 Pfam Protein kinase domain 9 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00587 Cmo-Chr5:2901096 Cmo10g00582 Cmo-Chr10:2651442 4.27E-09 dispersed
Cmo12g00137 Cmo-Chr12:856866 Cmo05g00587 Cmo-Chr5:2901096 5.91E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74347 PF00069 Pkinase 9.90E-34 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00587 - - mcha:111004720 258.455