Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo05g00632 | ATGGCGTCCGGCTCTCCTCCTTCGCGCATCGACCAGTTTTATGCTTCAAAGAAAAGGAATCCTCTTACTCCCAGTCTGAAGTCAGGGAGTTACGACAAGGATGGAAAAAGGTCACTTGAAGGGTCGCCTGGTACCAAAGGTACGTTGGACAATTACCTGGTGACCTACCTTGGCAACGATAACCCATCACATTCAGTTCGGGAAAACTTGTCTGGGCAAGAGCTAGTAAAGCGAAACCTATTGTTGAAAATTAATAGCTCCTCTAGAAATGAACATGAGGAACCCACTTTGTCTAAAGGGTTTCACACTTCTGAAGCAACTGAAGGAATCAAGAAAAGAACACTGGAAGACTCATACGAGACCAGAAGTTCAGCAGTCAAATCTATGGCAAGTGGCTGGGGTGTCACGCCGTGCATGGAGAAACCAGAGCTTAAACAGTTTGCAGCTGACTTCTTGTCTCTGTACTGCAGCAGTGAACTACAGACGACTGTTAGTTCGCCAGTAGAGCAAAAAGTAACTTTTAAGAGGCACTCCAGTCCATCTCTACTAGAGGGGGAGGCTAAATTACCGAAGAAGTTGCATATGATGGCGGGTCCATCAAATGCCAAAGGTGAAACCGATTCCTTAAGTGCATTGAGTGATGGAAACAAGCAGTCCAATTTTTTTGTAGAAACCGGGGATACTGACAATCACCATCCTGTTGCGCTTAAGGCATGCCTGCAGAAATGCAATAAAGCACCTATATCACCTTATTGTTTGACTGAATGCAGAACACCAGGCTTGTCGACTGCCAATGCATGTTTTCGTGAGACGCCCAAGTCTGGAAGCTCGTCATTTTCTCCTGGAGAAGCTTTTTGGAAAGAAGCAATTGTGTTTGCAGATGGTTTATGTGCTCCTAGCATTGACCTTACCAGTTACGATGCTGAAGGATCTAATCCTGCAGAGGGCCAGAGTAATACGAAGAAACTCCTAATACCAGGGGAACCCACTCAGAAAAGGTTAAAAGGACAGTTTGGTGGAGGTAGTGGTGGAGTCCGGCTTGGGGAACCTGGTGCTTCCATAGTTTCACTGAGGAGTGATTTGAAAGAGTTAAATAGAGAAGTGTCTTCACTTCCTGTTAAGCATTTTGACTTCTCGGCTGATGATAAAAACTTGGTTGAAAGTACATCACCTTCTTGTGCTTCAAATGAATCTAAAGTTCATGCATATGAACTTAATGAGCAGTCTGATTGTCGTTATACAACTCATGACAGTCCACCAAAGCATAATGAAAAGATCTGTGACAGAGATTCTCTTACAAAAGAGAAGATACATGAAACGAAAGTAACTTCGTCTGTTCCAATAGTGACTGAAGCGAAATTAAATATATTTAGTCCCTCTGATAGTATCACATCAGACACAGTGGTTCATGAACTTAGGGCTTCTACTGTTCAGGATTTTAAAGAGGGAATGACACCTTTAAGTTCAATAAGACATAAAGATTGGCTGGATCTAAGTTACTGGCTACCTCGTGAAATTTGCAGCATTTATAAAGAGAAAGGAATCACAAAACTGCATCCTTGGCAGGTTGAATGTCTTAATGTAGATGGTGTCTTACAGAGAAGAAATCTTGTTTATTGTGCATCTACCAGTGCTGGAAAAAGTTTTGTTGCTGAGATTTTAATGTTAAGGCGGGTAATTTCAACTGGAAAGATGGCACTTCTTGTACTTCCATATGTATCAATTTGTGTAGAAAAGGCCGCGCATCTTGATGTTCTTCTCGAACCTCTGGATAAGCATGTGCGTAGTTATTATGGAAATCAAGGTGGTGGAACGCTTCCCAAGGATACTTCTGTGGCTGTTTGCACAATTGAGAAGGCAAACTCTTTGATAAACAGATTGTTGGAAGAGGGTCGTTTGTCAGAAATTGGAATTATTGTGATAGATGAATTGCACATGGTTGGGGATCAGACGAGGGGTTATCTTTTGGAACTATTGTTGACAAAACTTCGTTATGCTGGTGGTGAAGGTAATTCAGATTCTAGCAGTGGGGAGAGTTCTGGGACAAGCAGTGGTAAGTCAGACCCTGCTCATGGTATTCAAATAGTTGGCATGAGTGCAACCATGCCAAACGTGGCAGCTGTTGCAGATTGGCTTCAGGCAGCCTTGTACCATACTGATTTTCGACCTGTTCCTCTAGAGGAGTACATTAAAGTTGGGAATATCATTTATAATAAAAGTTTGGACATTGTTAGAACAATCTCAAAAACAGCTAATCTTGGCGGTAAGGATCCAGATCACATTGTAGAATTATGTAATGAGGTAGTTGACGAGGGTCACTCAGTATTGATCTTTTGCTGTAGTCGGAAAGGATGTGAATCAACAGCAAAACATGTGTCAAAATTTCTTAAGAAGTTTTCTGTCAAACTTCATAATGAGAACAGTGAGTTTGCAGACATTTCTTCGGCAATTGATGCGCTGCGAAGATGTCCTGCTGGGCTGGATCCTATATTAGAGGAAACCTTTCCATCTGGCGTTGCCTACCACCATGCTGGCCTTACTGTTGAGGAAAGGGAGATTGTTGAAACGTGCTACCGCAAGGGTCTTTTGCGTGTTTTAACTGCTACATCAACCTTAGCTGCTGGAGTTAACCTGCCAGCTCGAAGGGTCATTTTCCGACAACCCAGGATTGGACGAGACTTTATTGATGGTACAAGGTATAAGCAGATGGCTGGTCGGGCTGGCCGGACTGGTATTGATACCAAGGGGGAAAGTGTACTCATCTGCAGACCAGAAGAGATTAAGAGAATTAATGAACTTCTTAATGAGAGCTGTCCACCACTGCAATCATGTTTGTCTGAAGATAAGAATGGAATGACTCATGCAATTTTAGAAGTCGTGGCTGGTGGGATTGTTCAAACTGCTACTGATATTCACCGATATGTAAGGTGTACTCTTCTGAATTCTACAAAACCATTTCAAGACGTGGTTAAATCAGCACAGGAATCTCTTCGGTGGTTATGCCATGGAAAATTTCTTGAATGGAACGGAGATACCAAGTTGTATAGTACCACGCCTCTTGGACGTGCATCATTTGGAAGCTCTCTTAGTCCAGAAGAATCACTAATTGTGTTGGATGATCTTTCAAGGGCCAGAGAAGGATTTGTGCTTGCATCTGATCTGCATTTGGTGTATCTAGTCACGCCGATCAATGTTGATGTTGAGCCAGATTGGGAGTTATATTATGAACGGTTTATGGGCCTGTCTTCTCTTGACCAGTCTGTTGGGAATCGAGTTGGAGTTACAGAACCATTTTTGATGCATATGGCACATGGTGCACCAGTTCGACGTGCAAACTTATCACGAAATGGTGTCAAGGGTTTACGTACAAAGCGTGATGAACATGGGTGTATGTATGGTGACAGACCTTCAGAGGAGCAAACTATTCGAGTGTGTAAACGATTTTATGTGGCTCTCATCTTGTCAAGACTTGTTCAGGAAACACCCATTCCTGAAGTTTGTGAAGCTTTTAAAGTTGCCAGAGGGATGGTTCAAGCATTACAAGAGAGTGCCGGAAGGTTTGCATCTATGGTCTCCGTATTTTGTGAGAGACTTGGATGGCATGATCTGGAAGGTTTGGTAGCCAAGTTCCAAAATCGTGTATCATTTGGAGTTAGAGCAGAGATTGTAGAACTTACTAGTATTCCATTTGTTAAGGGTTCTCGTGCCAGAGCATTCTACAAAGCTGGTTTGCGGACAACTTTAGCAATTGCAGAAGCCTCTGATGCTGAAATAGTTAAAGCTCTCTTTGAGTCTGCATCATGGACTGCAGAAGAGAGTACAGCACAAAAACGGATGCATGTTGGAATAGCAAGGAAGATTAAGCTTGGTGCTCGTAAAGTTGTCCTGGACAAAGCTGAAGAGGCAAGGATTGCTGCATTCTCGGCTTTTAAATCATTGGGGTTTATTGTGCCACAAATTTCTCGTCCCTTGTCAGCAAGTGCAGTTGGAAATATAAGAGCTCAAGTGGCTGCAATTGTTCCCTCTGAAATTGATACTTTTAACAGAGTTGTTAGCACAACACAAATGGAGCATGTTTCATCTAAGTCTTGTGTTGGAGGAACTTCCAGTTCTGAAAAAATAGGTGGAAAGAACCTGAGTGAAACAGGAGCAATTTCTGTTGAAGTAAAACGGCCCACTTTTGGTGTTGAAAATACAAGGATGAAGGTTGAAGGGTCAGCAATCCAGGAGGCAAACAGTGTTGTTGACTGTGCAGGAAAGGTAGATGTTGCAATCGCTAATCAAGTGGAAAAAATTAATGATAAAGATGCTGAGAGGGAACAGTGTAGTATTAAAGTTTTGCATCCTCCCAAAAGAGACGGTCTTTCTATGAAAGGTCCTATCCATGCAGTTAGTACATCTGGCGGATTTGAATCTTTCTTGGACTTGTGGGATGCTACCCAAGAATTTTATTTTGATCTCTATTACACCAAACGATCTGAAGTGAACTCTGTTGTCCCCTTTGAATTACATGGAATAGCAATCTGTTGGGAAAATTCTCCGGTCTATTATTTGAACCTCCCAAAGGATTTGTTGTGGCCCAAGACTGGAAAAGGTTTTTATCCGGATGACAGCACACCTGGTGACCAGTTAGATGTTTCGCAATATGAACATTGGTTTGAGATTGTAGAAAAGAGATGGAAAAAGATCAATGAAATTTTTGTGAAAGAGAATGTCAGAAAGTTTGCATGGAATTTGAAAGTTCAGATTCAGGTACTTAAATGTCCAGGAGTTTCCATCCAGAAATTGGGTTTATTGAATTCTGCTCGACGTAATATGGATCATAAACTTGTAGACGGTTCATACCTACTGCTGTCCAGTGTTCACATCAGCAATGGAATTGATATGTGCATTGTAGCTTGGATTCTTTGGCCAGATGACGAGAGAAATTCAACCCCTAACCTAGAGAAGGAAGTCAAGAAAAGATTATCTAGTGAAGCTGCTGCTGCTGCTAACCGAAGTGGCCAATGGAAGAATCAGATGAGAAGAGTAGCCCATAATGGTTGCTGTCGGCGTGCTGCACAGACACGAGCTCTATGTTCAGTTCTCTGGAAGTTAATAATTTCTGAAGAGCTCTTGAAAGCTCTCAACAATATAGAGATTCCATTGGTAAGTATTCTTGCTGATATGGAAACCTGGGGTATAGGTGTTGACATGGAGGGATGCATTCGGGCCCGTAATTTACTGGGGAAAAAACTCAGGTGCCTTGAGAAGGAAGCTTATAGGCTAGCTGGCATGACCTTCTCCCTGTACGCAGCAGCAGATATTGCTAATGTTCTATATGGACATTTGAAGCTCTCTATTCCAGAGAGGTTCAACAAAGGCAAACAACATCCAAGTACTGACAAGCAATGTTTGGACTTGCTGAGGAACGAACACCCTATTGTTCCAGTCATTAAAGAGCACCGGACATTGGCGAAGCTTTTTAACTGTACTTTGGGATCCATTTGCTCACTAGCCAAGCTCTCTGCGAGGACACAGAAATACACGCTACATGGACATTGGCTCCAAACATCCACAGCAACTGGTCGGCTTTCCATGGAGGAGCCTAATCTTCAGTGTGTTGAGCATGCGGTAGATTTCAAAGTGAATGAAGATGATGTTGATCATTGTAAAATTAATGCTCGTGATTTTTTCGTCTCTACTCAGGAAAATTGGCTGCTCTTATCGGCAGATTATTCTCAGATAGAGTTGCGGCTGATGGCACATTTTTCAAAAGACCCCTCACTGATTGAACTTCTCAGCAAGCCTCATGGAGATGTGTTTACCATGATTGCTGCTAGATGGACAGGGAAGACAGAAGACTCTATTGGATCTCATGAGCGAGATCAGACCAAAAGGTTGGTATATGGAATCCTTTATGGAATGGGCGCCAAATCACTTGCATTACAACTAGAATGTAGTAGAGATGAGGCTGTGGGGAAAATTCGAAGTTTCAAAAGTTCTTTCCCTGGCGTGGCTTCCTGGCTTCATGAGGCGGTTGCATTTTGCCGTCAGAAGGGGTATGTTGAAACTCTTAAAGGAAGAAGGCGCTTCTTGTCAAAAATTAACTCTCCAAATAGCAAAGAAAAATCAAAAGCACAGAGACAAGCTGTGAATTCAATTTGCCAGGGTTCAGCGGCTGACATAATCAAAGTGGCGATGATCAACCTTTACTCCGTAATCAGACCTGACGCTCCAGATCTTACAGAGTCACCTGCAGCTAACAATAATATATTGAGGGGTCATTGTCGAATTGTATTACAGGTGCATGATGAGTTAGTGCTGGAAGTGGACCCTTCCGTCGTTAAGGAGGCAGCAGCTTTGTTACAGAAGAGCATGGAAAATGCTGCCTCCCTTCTGGTTCCTTTGCAAGTCAAACTGAAAGTTGGACGAACATGGGGTTCTTTGGAGCCATTCTTGCTTGATCACTTCAAGATTGATGATCTTGTAACTGGATCTTGA | 6483 | 42.59 | MASGSPPSRIDQFYASKKRNPLTPSLKSGSYDKDGKRSLEGSPGTKGTLDNYLVTYLGNDNPSHSVRENLSGQELVKRNLLLKINSSSRNEHEEPTLSKGFHTSEATEGIKKRTLEDSYETRSSAVKSMASGWGVTPCMEKPELKQFAADFLSLYCSSELQTTVSSPVEQKVTFKRHSSPSLLEGEAKLPKKLHMMAGPSNAKGETDSLSALSDGNKQSNFFVETGDTDNHHPVALKACLQKCNKAPISPYCLTECRTPGLSTANACFRETPKSGSSSFSPGEAFWKEAIVFADGLCAPSIDLTSYDAEGSNPAEGQSNTKKLLIPGEPTQKRLKGQFGGGSGGVRLGEPGASIVSLRSDLKELNREVSSLPVKHFDFSADDKNLVESTSPSCASNESKVHAYELNEQSDCRYTTHDSPPKHNEKICDRDSLTKEKIHETKVTSSVPIVTEAKLNIFSPSDSITSDTVVHELRASTVQDFKEGMTPLSSIRHKDWLDLSYWLPREICSIYKEKGITKLHPWQVECLNVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICVEKAAHLDVLLEPLDKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAGGEGNSDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPVPLEEYIKVGNIIYNKSLDIVRTISKTANLGGKDPDHIVELCNEVVDEGHSVLIFCCSRKGCESTAKHVSKFLKKFSVKLHNENSEFADISSAIDALRRCPAGLDPILEETFPSGVAYHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICRPEEIKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMGLSSLDQSVGNRVGVTEPFLMHMAHGAPVRRANLSRNGVKGLRTKRDEHGCMYGDRPSEEQTIRVCKRFYVALILSRLVQETPIPEVCEAFKVARGMVQALQESAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPFVKGSRARAFYKAGLRTTLAIAEASDAEIVKALFESASWTAEESTAQKRMHVGIARKIKLGARKVVLDKAEEARIAAFSAFKSLGFIVPQISRPLSASAVGNIRAQVAAIVPSEIDTFNRVVSTTQMEHVSSKSCVGGTSSSEKIGGKNLSETGAISVEVKRPTFGVENTRMKVEGSAIQEANSVVDCAGKVDVAIANQVEKINDKDAEREQCSIKVLHPPKRDGLSMKGPIHAVSTSGGFESFLDLWDATQEFYFDLYYTKRSEVNSVVPFELHGIAICWENSPVYYLNLPKDLLWPKTGKGFYPDDSTPGDQLDVSQYEHWFEIVEKRWKKINEIFVKENVRKFAWNLKVQIQVLKCPGVSIQKLGLLNSARRNMDHKLVDGSYLLLSSVHISNGIDMCIVAWILWPDDERNSTPNLEKEVKKRLSSEAAAAANRSGQWKNQMRRVAHNGCCRRAAQTRALCSVLWKLIISEELLKALNNIEIPLVSILADMETWGIGVDMEGCIRARNLLGKKLRCLEKEAYRLAGMTFSLYAAADIANVLYGHLKLSIPERFNKGKQHPSTDKQCLDLLRNEHPIVPVIKEHRTLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKVNEDDVDHCKINARDFFVSTQENWLLLSADYSQIELRLMAHFSKDPSLIELLSKPHGDVFTMIAARWTGKTEDSIGSHERDQTKRLVYGILYGMGAKSLALQLECSRDEAVGKIRSFKSSFPGVASWLHEAVAFCRQKGYVETLKGRRRFLSKINSPNSKEKSKAQRQAVNSICQGSAADIIKVAMINLYSVIRPDAPDLTESPAANNNILRGHCRIVLQVHDELVLEVDPSVVKEAAALLQKSMENAASLLVPLQVKLKVGRTWGSLEPFLLDHFKIDDLVTGS | 2160 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3185501 | 3202454 | - | CmoCh05G006320.1 | Cmo05g00632 | 382767 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo05g00632 | 2160 | Pfam | Helicase conserved C-terminal domain | 763 | 911 | IPR001650 | - | |
| Cmo05g00632 | 2160 | Pfam | DNA polymerase family A | 1735 | 2141 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
| Cmo05g00632 | 2160 | CDD | DEXHc_POLQ-like | 502 | 723 | - | - | |
| Cmo05g00632 | 2160 | Gene3D | Taq DNA Polymerase; Chain T, domain 4 | 1727 | 1839 | - | - | |
| Cmo05g00632 | 2160 | Gene3D | - | 1853 | 2140 | - | - | |
| Cmo05g00632 | 2160 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cmo05g00632 | 2160 | Pfam | DEAD/DEAH box helicase | 531 | 704 | IPR011545 | GO:0003676|GO:0005524 | |
| Cmo05g00632 | 2160 | SMART | polaultra3 | 1885 | 2108 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
| Cmo05g00632 | 2160 | Gene3D | - | 1909 | 2053 | - | - | |
| Cmo05g00632 | 2160 | SMART | ultradead3 | 514 | 729 | IPR014001 | - | |
| Cmo05g00632 | 2160 | SUPERFAMILY | Sec63 N-terminal domain-like | 1123 | 1256 | - | - | |
| Cmo05g00632 | 2160 | Gene3D | - | 1099 | 1241 | - | - | |
| Cmo05g00632 | 2160 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 760 | 952 | IPR001650 | - | |
| Cmo05g00632 | 2160 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 528 | 720 | IPR014001 | - | |
| Cmo05g00632 | 2160 | SMART | helicmild6 | 829 | 911 | IPR001650 | - | |
| Cmo05g00632 | 2160 | CDD | DNA_pol_A_theta | 1727 | 2143 | - | - | |
| Cmo05g00632 | 2160 | PANTHER | DNA POLYMERASE I | 519 | 2146 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | MobiDBLite | consensus disorder prediction | 669 | 688 | - | - | |
| Cmo05g00632 | 2160 | SUPERFAMILY | DNA/RNA polymerases | 1705 | 2143 | IPR043502 | - | |
| Cmo05g00632 | 2160 | CDD | SF2_C_Ski2 | 722 | 923 | - | - | |
| Cmo05g00632 | 2160 | MobiDBLite | consensus disorder prediction | 87 | 120 | - | - | |
| Cmo05g00632 | 2160 | Gene3D | - | 734 | 932 | IPR027417 | - | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 1844 | 1866 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 1900 | 1923 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 1955 | 1980 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 1992 | 2003 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 2014 | 2025 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | PRINTS | DNA-polymerase family A (pol I) signature | 2046 | 2062 | IPR002298 | GO:0003887|GO:0006261 | |
| Cmo05g00632 | 2160 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 531 | 925 | IPR027417 | - | |
| Cmo05g00632 | 2160 | Gene3D | - | 501 | 723 | IPR027417 | - | |
| Cmo05g00632 | 2160 | Gene3D | - | 1462 | 1724 | IPR036397 | GO:0003676 | |
| Cmo05g00632 | 2160 | MobiDBLite | consensus disorder prediction | 86 | 120 | - | - | |
| Cmo05g00632 | 2160 | Pfam | Helix-turn-helix domain | 916 | 1006 | IPR046931 | - | |
| Cmo05g00632 | 2160 | PANTHER | DNA POLYMERASE THETA | 519 | 2146 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo05g00632 | K02349 | POLQ; DNA polymerase theta [EC:2.7.7.7] | - | csv:101215433 | 3661.69 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g01025 | Cmo-Chr4:5129780 | Cmo05g00632 | Cmo-Chr5:3185501 | 4.76E-15 | dispersed | |
| Cmo05g00632 | Cmo-Chr5:3185501 | Cmo13g01125 | Cmo-Chr13:9154080 | 1.87E-27 | dispersed | |
| Cmo05g00632 | Cmo-Chr5:3185501 | Cmo16g00903 | Cmo-Chr16:5382706 | 5.60E-16 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g343 | . | . | . | . | Bpe02g01197 | . | . | . | Cmo05g00632 | . | . | Cma05g00730 | . | . | . | . | . | Bhi04g00821 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone17ag1106 | . | . | . | . | Cme03g01725 | . | Blo18g00068 | . | . | . | . | Bma01g01331 | . | . | . | . | . | . | . | Car05g00549 | Cpe11g00651 | . | . | . | . | . | . | . | . | Cla08g01238 | Cam08g1696 | Cec08g1275 | Cco08g1396 | Clacu08g1393 | . | Cre08g1178 | Lsi08g01101 | . | Chy03g01230 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0007306 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 35 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cmo05g00632 | Cmo_Chr05 | FPKM | 25.525974 | 27.404715 | 29.606983 | 32.83234 | 30.756723 | 27.376287 | 32.009464 | 29.615757 | 29.522112 | 31.426947 |