Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00650 ATGACGGCACCGGTGTTGGTTGATGGGAAGGGGAAGGGGAAGAAGAATATTGAGAATTTGGTCTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGCTCTAGGATTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGAGATTAGCCAAAGATTGCCGACTTTAGAAGCGGCTGTTAGGCCTATTCGTGCTGATAAGGAAGCTCTGGTCGCCGTCGGTGGCCATATAAACCGTGCTGTTGGCCCTGCGGCGGCGGTGCTTAAGGTTTTTGATGCTGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCGCGGAATGATCTCCCTGGTTATTTGTCGGTGTTGAAACGAATGGAGGAGGCATTGAGATTCTTGGGAGATAACTGTGGGCTGGGAATCCAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGATAATACTGTGGCTGATGAGAAATATCTTGGGAGTTTGAAGAACTCGTTGAAGAAACTGAGGGATTTACAGAGTGATGAGGAGAAGACTGAGCTTGATGGAGGTCTTTTGAATGCTGCTTTAGATAAACTAGAGAACGAGTTTAGGCGTCTGTTAACGGAGCACAGCGTTCCACTTCCCATGTCTTCTGCAGCGTCTGTCGGTGAGCAAGCTTGCATTGCTCCATCTCCATTGCCTGTGACTGTTATTCACAAACTTCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTCGAACGATGCATATCCATTTACGTTGAAGTTCGTAGTTGTAACGTTAGGGCTAGTTTACAGGCTCTTGGTTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAATGATGTACAGAGCATCGAAGGGTACATTGCGAAATGGGGAACGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAAGCTGAATTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTTTGGATGGGTTGTTTTGCAAAGATAGCAACTCAAGCTGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTTACAGAAAGCAAGAATGATCCTATTAAGCTATTGAAGTTGTTAGATATCTTTGCATCCTTGAACAAACTGAGACTCGACTTTAATAGGCTGTTCGGCGGGGCTGCCTGTTTGGAAATTCAAAACTTGACTCGAGATCTAATTAAGAGGGTTATCGATGGCGTAGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGCTCCAGAGGCAAAATCCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAACTTCATTATCGATTACAGTAATAAACTGCTCAGCGATGGTTATCGGCCGATCCTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGCTCTTCTTGTCGGTGAGGTAACGAACCTTGTCAAAGCCATTGAGCAGAATCTGGACACTTGGATAAAGGCTTATGAAGATTCGACCTTGTCGAACTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACGAAAGTCGGAGAACTAATGGGAGACAAAGTAAAGGAACATGAACAGTACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGTCATTTAAGCAGGGAGGGTTTGATTATGTTCTCGGGTGGACGAGCGACTGCTCGCGATCTTGTTAAGAAACGTTTAAAGACATTCAATGAAGCTTTTGAAGACATGTACAAGAAGCAGTCAAACTGGGTTATAACTGACAGAGAATTGAGGGAGAAGACATCCCAACTTATCGTTCAAACCATCGTGCCCGTTTACCGTAGCTACATGCAAAATTATGGCCCTCTGGTCGAGCAAGACGCAAGTTCGAGTAAGTATGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTGCTGTCCCTCTTTCACCCAAAGCCGCTTCGGTACAGCAGCCTCAAAGTTAGGCAGACTAGTGGGAAATTCAGCAATGGCGCCGCAGATCATCGTCGTTCCAACTCCATGGTTCTGTGA 2055 45.01 MTAPVLVDGKGKGKKNIENLVSATRSLKASLEKSRALGFALQKAGSRLEEISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLGIQWLEDIVEYLEDNTVADEKYLGSLKNSLKKLRDLQSDEEKTELDGGLLNAALDKLENEFRRLLTEHSVPLPMSSAASVGEQACIAPSPLPVTVIHKLQAILGRLIANKRLERCISIYVEVRSCNVRASLQALGLDYLEISVSEFNDVQSIEGYIAKWGTHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGVAEIFWELLVQVELQRQNPPPLDGAVPRLVNFIIDYSNKLLSDGYRPILTQALVIHRSWKKEKFQEALLVGEVTNLVKAIEQNLDTWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKVKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVITDRELREKTSQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFHPKPLRYSSLKVRQTSGKFSNGAADHRRSNSMVL 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3281102 3283156 + CmoCh05G006500.1 Cmo05g00650 382785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00650 684 Pfam Exo70 exocyst complex subunit 292 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo05g00650 684 Gene3D Exocyst complex component Exo70 140 657 - -
Cmo05g00650 684 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 16 673 - -
Cmo05g00650 684 SUPERFAMILY Cullin repeat-like 89 651 IPR016159 -
Cmo05g00650 684 Coils Coil 160 180 - -
Cmo05g00650 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 673 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00650 Cmo-Chr5:3281102 Cmo17g00621 Cmo-Chr17:6530930 0 dispersed
Cmo12g00250 Cmo-Chr12:1623698 Cmo05g00650 Cmo-Chr5:3281102 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00650 K07195 - csv:101207478 1254.58