Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00693 ATGGGTTTGGTTGAAGAATACTTGCCAGCAATGGCCATGTTTGGGCTTCAAGTCACTTATGCCATTATGGCTCTCCTCTCCCGAGCTGCCCTCTTGAAGGGCATGAGTCCTAGAGTGTTCGTTGTTTATAGGCAGGCCATTGCCACTCTTTTTATTGCACCCATCGCTTATTTCTCAAGGCCGAAATCAAGGAGGTTGTCTTTGGATTTGAAGAGCTTTTCTCTAATTTTTCTAGCTGCTCTTGTCGGGGCAACCATGAATCAAAATGTTTACTTTGAGGGAGTTTTCTTGGCTGGCTCGTCAATGGCGACGGCGATGACGAATTTGATACCGGCGGTGACGTTTGTGATAGCGACGATGGTCGGGATGGAGAGTTTGAAGATGAGAAGCTTAAGGAGCATGGCAAAGATTGGAGGGACAGTGATTTGTGTGAGTGGGGCTATGTGCATGGCTCTTCTTAGGGGTCCAAAGCTTCTCAATTCATCATTAGGGTTTGGGATGAAATCTTCAATATTTAGTGTGGAAAGTGGAAGTCCCCATGCTTGGCTCTTGGGTTCCTTGTGTGTACCAGCTTCAGCAAGCTATCCCGACAACTTATCATTATCAGCTTGGATGTGTTTGTTTGCCACGATTCAGTCGATCATTGTCACTCTATTAGTAGAGCCAATGAAGGTAGAAACGTGGAAAATACATTCAACAATGGAAGTCATTTGTTATCTCTTCTCAGGAATTGTTGGCTCAGGCATTGCCTTCTTTCTTCAAGCTTGGTGTGTTTCAAAAAGAGGCCCCGTCTTCTCTGCAATGTTCAACCCTCTTTGCACCATTGTCACAACTATTTTGGCAGCTATAGTTCTTCATGAGGAGATTTTTACTGGAAGCTTGGTGGCGGGTGTGGCTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAGGCCAAAGATTATGTGAAGGAAGAACATGGGGGAAAGGGAGCTGTTGAAAAAGAAGAAGAGGATTGTGAATCAGCTTCAACGGACAGAAGTAGCTCTAAAATTGGTTTGGAGGAACCCCTTTTGTTTGAAGGAGCTACACATCATATTGACAGCTAG 1089 44.44 MGLVEEYLPAMAMFGLQVTYAIMALLSRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRPKSRRLSLDLKSFSLIFLAALVGATMNQNVYFEGVFLAGSSMATAMTNLIPAVTFVIATMVGMESLKMRSLRSMAKIGGTVICVSGAMCMALLRGPKLLNSSLGFGMKSSIFSVESGSPHAWLLGSLCVPASASYPDNLSLSAWMCLFATIQSIIVTLLVEPMKVETWKIHSTMEVICYLFSGIVGSGIAFFLQAWCVSKRGPVFSAMFNPLCTIVTTILAAIVLHEEIFTGSLVAGVAVIIGLYIVLWGKAKDYVKEEHGGKGAVEKEEEDCESASTDRSSSKIGLEEPLLFEGATHHIDS 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3541755 3544344 + CmoCh05G006930.1 Cmo05g00693 382828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00693 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 204 312 - -
Cmo05g00693 362 Pfam EamA-like transporter family 196 308 IPR000620 GO:0016020|GO:0016021
Cmo05g00693 362 Pfam EamA-like transporter family 12 131 IPR000620 GO:0016020|GO:0016021
Cmo05g00693 362 PANTHER WAT1-RELATED PROTEIN 10 320 - -
Cmo05g00693 362 MobiDBLite consensus disorder prediction 320 344 - -
Cmo05g00693 362 MobiDBLite consensus disorder prediction 320 338 - -
Cmo05g00693 362 PANTHER WAT1-RELATED PROTEIN 10 320 IPR030184 GO:0016021|GO:0022857
Cmo05g00693 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00693 Cmo-Chr5:3541755 Cmo12g00831 Cmo-Chr12:7577721 0 dispersed
Cmo11g00429 Cmo-Chr11:2112983 Cmo05g00693 Cmo-Chr5:3541755 6.98E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00693 - - csv:101213601 560.451