Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00699 ATGGATTCTCAACTTACCAACGCCCAGGATTTCATCTTCCGATCAAAGCTCCCCGACATCTACATCCCAAACCACCTCCCCCTCCACACCTACTGCTTCGAACACCTCTCCCAATTCCACCACCGCCCCTGCCTAATCAACGCTGCCACCGGCCAAATCCACACCTACGCCGCGGTCGACCTAGCCGCCAGACGCGTTGCCACCGGTCTAAGCAAGATCGGTGTCGGACAAGGCGATGTCATAATGCTTCTACTACAGAACAGCCCTGAATTCGTCTTCGCCTTCCTTGGCGCGTCCTATGCCGGCGCCATTAGCACCACCGCAAATCCATTATACAAGCCGGCGGAGATCAAGAAACAGGCGGCCACGGCGAGGCCGAAGGTTATAATTACGCAAGCGGAATTTGTGGAGAAAGTTCGGGAATTTGCGGTGGAAAATGGGGTGAAAATTATATGTACGGATTCCCCGCCGGTGGGTTGCCTGAGATTCTCCGAGATCTTAGAGGCCGATGAAAATGAAATTCCGGCGGTGAAAATTAACTCCAACGATGTTGTGGCTCTTCCGTTCTCGTCTGGAACCACCGGAGTTCCTAAAGGCGTTATGCTCACACACAAATCTCTCGTTACAAGCATTGCTCAACAGGTGGACGGAGAGAATCCAAATGTGGACTTAAACAGCAACGACGTGCTTATATGTCTTCTTCCATTATTCCATATCTACTCTCTCAATTCCGTTCTCCTCTGCGGACTACGTGTCGGCGCGGCCATTCTCATCCTCCAAAAATACGACATGTCGTCTCTTCTCCGCCTCATTCAGACCCACAAAGCCACTATAGCCCCCTTCGTCCCTCCCATCGTCTTGGACTTCGCCAAAAACCCCGACATCCACCGTTACGACTTGTCGTCCATCAGAATCGTCATGTCGGGTGCTGCCCCCATGGGCAAGGCCCTGGAAGATACCGTCAAGGCCAGACTTCCCAACGCCACGCTTGGACAGGGATATGGGATGACGGAGGCCGGTCCGGTTCTGTCGATGTGTCTGGGTTTCGCAAAGGAGCCGTTCGAGTTTAAATCAGGTGCGTGCGGGACCGTCGTAAGGAACGCTGAGATGAAGATCATACACCCTGAAACTGGTGTATCTTTGCCACGTAATCACCCTGGTGAGATCTGCATACGTGGCTCCCAGATCATGAAAGGTTACCTTAATAACAAAGAAGCCACAGAGAAGACTATAGACAAGAATGGGTGGCTCCACACTGGAGACTTGGGGTTCATCGACGACGACGACGAGATCTTCATCGTCGATCGACTGAAGGAACTGATCAAATACAAAGGATATCAAGTGGCCCCAGCTGAGCTTGAAGCTCTCTTGACTTCAAACCCTAATGTTTCTTCTGCTGCTGTCGTACCAATGGAAGATGAAGCAGCTGGAGAGATCCCGGCTGCATTTGTTGTTAGATCTAAAGGCTCCAAGATTAGTGAGGATGATATCAAGAAGTATATTTCTGATCAGGTTATATATTACAAGAAAATCAGGAAGGTTTTCTTTGTGGACTCAATTCCAGTTGCTCCTTCAGGCAAGATCTTGAGGAAAGTGTTAAAAGCTCAATTGGAGAATGTTGTTCGTAACTATATACCCGTACTAAGAATAAGGTTGTGTAAGTGGAACCGGGTGCACACGTACACGTTACAATACGCTAACCTAGAGTTGTAG 1713 49.85 MDSQLTNAQDFIFRSKLPDIYIPNHLPLHTYCFEHLSQFHHRPCLINAATGQIHTYAAVDLAARRVATGLSKIGVGQGDVIMLLLQNSPEFVFAFLGASYAGAISTTANPLYKPAEIKKQAATARPKVIITQAEFVEKVREFAVENGVKIICTDSPPVGCLRFSEILEADENEIPAVKINSNDVVALPFSSGTTGVPKGVMLTHKSLVTSIAQQVDGENPNVDLNSNDVLICLLPLFHIYSLNSVLLCGLRVGAAILILQKYDMSSLLRLIQTHKATIAPFVPPIVLDFAKNPDIHRYDLSSIRIVMSGAAPMGKALEDTVKARLPNATLGQGYGMTEAGPVLSMCLGFAKEPFEFKSGACGTVVRNAEMKIIHPETGVSLPRNHPGEICIRGSQIMKGYLNNKEATEKTIDKNGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNVSSAAVVPMEDEAAGEIPAAFVVRSKGSKISEDDIKKYISDQVIYYKKIRKVFFVDSIPVAPSGKILRKVLKAQLENVVRNYIPVLRIRLCKWNRVHTYTLQYANLEL 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3587233 3592824 + CmoCh05G006990.1 Cmo05g00699 382834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00699 570 SUPERFAMILY Acetyl-CoA synthetase-like 10 541 - -
Cmo05g00699 570 CDD 4CL 22 533 - -
Cmo05g00699 570 Pfam AMP-binding enzyme 35 443 IPR000873 -
Cmo05g00699 570 Gene3D - 3 437 IPR042099 -
Cmo05g00699 570 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 539 - -
Cmo05g00699 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 539 - -
Cmo05g00699 570 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Cmo05g00699 570 Gene3D - 438 542 IPR045851 -
Cmo05g00699 570 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00699 Cmo10g00432 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00699 Cmo-Chr5:3587233 Cmo14g01057 Cmo-Chr14:5785268 0 dispersed
Cmo02g00478 Cmo-Chr2:2613807 Cmo05g00699 Cmo-Chr5:3587233 0 transposed
Cmo18g00635 Cmo-Chr18:8064232 Cmo05g00699 Cmo-Chr5:3587233 1.71E-138 transposed
Cmo10g00432 Cmo-Chr10:1969688 Cmo05g00699 Cmo-Chr5:3587233 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00699 K01904 - csv:101210868 931.398