Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00703 | ATGGCTTTTCTAGAGGTAAAACAGAAACTCCTACGCGAGATTGAAGATCTAGGATTCCCAAGGGCCCGAGCTGTCCGAGCACTTCATAGTACTGGGAATGTCAGCACTGAAGCTGCAATTAATTGGCTCATTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCTGGTAGCAATAGAGATTGATATTGAATCTCCTGAACCATTTCATATCACAGAGGAAATGAAAAGAAAGGCTAAGGAACTAAGGGATCAAATACGGAAAGAAAAAGAAAAAGAAGAAAAAAAGTTAGAAAGACAGAGGGAGAAGGACAGAATTCGTTCTGGTAAAGAATTACAAGAAGCAAAAAGAACTGCAGAAGAAGCTGAACGGAAACGCTATATAGACTCTAGGCAAGCTGATAAACAGGAGGAGAAGAGAGCAAGGGAAAAAGTTCTACAAAAACTTCAACAAGATAAGATAGAAAGAAGGAGGAATAGTGGAATGCTCTCTGAAAGGTCAGAAAGCCTTGATACAAAATCTAACGCCACCGAAGCAGGGAAAAAGGATGAACTTAGATCGCAGAATTCACTGCCAGCAACTTCAGTTAGTAAAGCAGTTTCTATGAGAGAATGCTTAAGGTCTCTTAGGCGCCATCAAAAGGATGATTCTGATAAAGTGAGAACTGCCTACCGAACCCTCTTTATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAAGTTTAGGAAGATTCGACTCAGTAACCCTTTGTTCCAGGAGAGAGTTGGGAGTTTGAAAGGAGGGATAGAGTTTCTGGAGCTTTGCGGGTTTGAGAGAGGAGGAGAGTTTCTGTACCTTCCCCGGGATAAAGTCGACCGGGGGGCTTTAGTCACTGCTGGATCACTGTTAGAATCTGCAATGACAAATCCCTTTTTTGGTGCAATATAA | 936 | 41.56 | MAFLEVKQKLLREIEDLGFPRARAVRALHSTGNVSTEAAINWLIDHENDPDIDQMPLVAIEIDIESPEPFHITEEMKRKAKELRDQIRKEKEKEEKKLERQREKDRIRSGKELQEAKRTAEEAERKRYIDSRQADKQEEKRAREKVLQKLQQDKIERRRNSGMLSERSESLDTKSNATEAGKKDELRSQNSLPATSVSKAVSMRECLRSLRRHQKDDSDKVRTAYRTLFIYVRNVAKNPDEEKFRKIRLSNPLFQERVGSLKGGIEFLELCGFERGGEFLYLPRDKVDRGALVTAGSLLESAMTNPFFGAI | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3606682 | 3611418 | + | CmoCh05G007030.1 | Cmo05g00703 | 382838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00703 | 311 | PANTHER | UBX DOMAIN-CONTAINING PROTEIN 1-LIKE | 1 | 310 | - | - | |
Cmo05g00703 | 311 | PANTHER | F13M7.16 PROTEIN | 1 | 310 | - | - | |
Cmo05g00703 | 311 | Pfam | PUB domain | 219 | 289 | IPR018997 | - | |
Cmo05g00703 | 311 | CDD | UBA_PUB_plant | 5 | 53 | - | - | |
Cmo05g00703 | 311 | Gene3D | - | 8 | 53 | - | - | |
Cmo05g00703 | 311 | SMART | PGNneu | 223 | 284 | - | - | |
Cmo05g00703 | 311 | MobiDBLite | consensus disorder prediction | 172 | 186 | - | - | |
Cmo05g00703 | 311 | Pfam | UBA/TS-N domain | 11 | 43 | IPR015940 | - | |
Cmo05g00703 | 311 | Coils | Coil | 73 | 126 | - | - | |
Cmo05g00703 | 311 | Gene3D | - | 205 | 299 | - | - | |
Cmo05g00703 | 311 | SUPERFAMILY | UBA-like | 5 | 56 | IPR009060 | GO:0005515 | |
Cmo05g00703 | 311 | MobiDBLite | consensus disorder prediction | 90 | 165 | - | - | |
Cmo05g00703 | 311 | MobiDBLite | consensus disorder prediction | 90 | 197 | - | - | |
Cmo05g00703 | 311 | SUPERFAMILY | PUG domain-like | 200 | 307 | IPR036339 | - | |
Cmo05g00703 | 311 | Coils | Coil | 133 | 156 | - | - | |
Cmo05g00703 | 311 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 5 | 46 | IPR015940 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02213 | Cmo-Chr4:16490883 | Cmo05g00703 | Cmo-Chr5:3606682 | 4.41E-08 | dispersed | |
Cmo05g00703 | Cmo-Chr5:3606682 | Cmo15g01021 | Cmo-Chr15:5989272 | 4.12E-08 | dispersed | |
Cmo08g00933 | Cmo-Chr8:6070593 | Cmo05g00703 | Cmo-Chr5:3606682 | 3.61E-112 | transposed | |
Cmo12g01011 | Cmo-Chr12:9458895 | Cmo05g00703 | Cmo-Chr5:3606682 | 2.39E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00703 | - | K24348 | csv:101210384 | 476.863 |