Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00706 AATGATTTTGTCGGGATGTTTTTTTTTATTCCTGATGATGTATCAATTGGATATGGGGAAACCGAAGGATTTGGTTCGTTGAAAACCGAGGAACTTGGGAGTTGCTTTCTGGGCTGCAAACAGATGGGTAGCCCTTTGACATCGATCTCAGCCCCTAATTCCTCACCTGTTTCGAATCCTGGTTCGAATGATGAAAACCCGCGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGTTATGTTGGGGGAGAGACAAGGATTGTGAGTGCTCCAAGGGATATTACATATGAGGAGTTGATGGTTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCTTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCGGGTGACGGATTCACTAGGCTCAGGATATTCTTGTTTTCGAATCCAGAACAAGAATGTTCCTTGCCTTTTGTGGATGGGGATGAGAGGGATACTGAGAGGCGATATGTAGATGCTCTTAATAATTCGAATGACGTGAATGATTTTGTTCGACAACAGCAGCCAGATTCCCCTGTAATTAGTGGCATAGATGATGTGCACGGGATAGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACCCAGAGGAGTTGTGAGCCATTGTCACAATATCAGCTGCATCAGCTCGCAGTCCCTTATATTGGATCTGGGCAGCAACAACAATCCATGGCTCAAAGGTATAGTGAAATGGAAGCTCCGTGGAGTCCTGCTTTCGTTTCACCCAGGCATCCTGGTCTGTATGATCCAAGACCAGTGGGAGAATATCCATCTTCTCCATCTGCGTGGTACCGTCTGCCATTCCCTGATTTTCCAGATAAATACTTCGAAAGAATGCCTGAAGATTACGCCAGGGAGCAAATGAATCACCAGTATATGTATGAACATCAACCACAATCTAATGAGAACACTGTCTGGCTGCCAAATGGACCTATTAGTGAAAAGTCAGGTTTCCCTGGTAATATATTACACGGACATGGTGTTCCTGATGGGAATAGTTCTTGTGAACACTGTCGATCAAATTATCATCGGTATCAAACACACATGGAGCAAGCTAATATGTTAAATGGACTTCCTCATGAATACTCTCAGAATAGGGAGGCATTGATGCAAAAGGCTGACACGAAGTTCCATCATGGTATTTTCCCAAATGAGCAGAATATTAATGATCCTCGATCTGCTTATAACGAGACACCACCCCATGAGAGAGGATGGATTATGCAACACCAGATGAGCGTGCGGGGGGATGACACGAGAACATATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCAAGCTTCCATGAATTTTCATGATGAGGTATTTCGTGACCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCTGAAGATCGCGGTGTTGGTTATATGAATATGCCTTATGGATATGGAGCAGATCCTCAATATCCTCCTGTGGCACACAGGCATATGCCTGGAAATACTGCCTGGCGAAATGTTCAGAACCCGTCACATGCTGCTCCTCCTTATGAAGCATCTGTTTCCATTCAGCAAGGGAATGTGACTGTTAATCCAGGATATATCAGAGCCATGCAGGAGGGTAGTCCCCGCATTCATATTGGTACGGACCATCAAAATCCTTGGCATGAATCCTCACAGAAAATGTTGGGTATTGAGGGAGCAACTGGTTCAGAGCATTTACCTGCACTTGTTTTGAAGACCAATTCGACCATGGTTGGCCATGACAATCAACAATTCACAAATCTAGAACATGTCCAACCACATCTAGATAAGATAAACCTCATCGCTTCTCCTTTGCAAAGATCAGATTCATCTTCAGCATTTATTCATGAAAAAATGATTTCACCTTTTAATCCTAGCCAAAATCCACAACCGAGGACTGTTAGTGTGATTAATGAAGCTATGATGATGGAAAGGAAAATTGTGCCTGGGGAAGGAAACGAACACATGATAACTGATATGGGGGAAGCTGACATTTCTGAAGCACGCGTTGTATCTCATCCAGAGCAGAATAACACGGATGATACATATTCCAAGGATGTACCCCCTGAATCGTTAAATTCAAATTGCACGAATACTCCAGTAGATAATGGTGATGACTTGAAATCTGCTGTAGAGACTCTTGAAAATCCAAAACTATCTGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCATTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCTAAGGAGACCTGATTCAGTAGGAAAAAAAGAGACAGCTAATGAGCTAGGCTCCTTGAACGCCCATGGGGAACCTGAGTTGGAAACTGGGAGTGAGAATCAAAGCTCCACAATTGAGCCAACAAAGGCTGAAGAAGAAGCCATTTCAAGAGGATTACAAACGATTAACAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATAAAAGCTAGCTGTTTTTCTGGACGACCCTCAGAAAGGGAACGTCTGGTAGAATCTTGGACTTATTGCTCTTCCTTTCACTAG 2784 43.43 NDFVGMFFFIPDDVSIGYGETEGFGSLKTEELGSCFLGCKQMGSPLTSISAPNSSPVSNPGSNDENPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSAPRDITYEELMVKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSNPEQECSLPFVDGDERDTERRYVDALNNSNDVNDFVRQQQPDSPVISGIDDVHGIEHFLNPMNIEGSLHTQRSCEPLSQYQLHQLAVPYIGSGQQQQSMAQRYSEMEAPWSPAFVSPRHPGLYDPRPVGEYPSSPSAWYRLPFPDFPDKYFERMPEDYAREQMNHQYMYEHQPQSNENTVWLPNGPISEKSGFPGNILHGHGVPDGNSSCEHCRSNYHRYQTHMEQANMLNGLPHEYSQNREALMQKADTKFHHGIFPNEQNINDPRSAYNETPPHERGWIMQHQMSVRGDDTRTYVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYQASMNFHDEVFRDQVVPSGQHMCVPPPEDRGVGYMNMPYGYGADPQYPPVAHRHMPGNTAWRNVQNPSHAAPPYEASVSIQQGNVTVNPGYIRAMQEGSPRIHIGTDHQNPWHESSQKMLGIEGATGSEHLPALVLKTNSTMVGHDNQQFTNLEHVQPHLDKINLIASPLQRSDSSSAFIHEKMISPFNPSQNPQPRTVSVINEAMMMERKIVPGEGNEHMITDMGEADISEARVVSHPEQNNTDDTYSKDVPPESLNSNCTNTPVDNGDDLKSAVETLENPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETALRRPDSVGKKETANELGSLNAHGEPELETGSENQSSTIEPTKAEEEAISRGLQTINNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFSGRPSERERLVESWTYCSSFH 927
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3625543 3628687 + CmoCh05G007060.1 Cmo05g00706 382841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00706 927 Pfam PB1 domain 84 168 IPR000270 GO:0005515
Cmo05g00706 927 ProSiteProfiles Protein kinase domain profile. 872 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g00706 927 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 59 918 - -
Cmo05g00706 927 MobiDBLite consensus disorder prediction 829 858 - -
Cmo05g00706 927 CDD PB1_UP2 72 168 - -
Cmo05g00706 927 Gene3D - 87 170 - -
Cmo05g00706 927 ProSitePatterns Protein kinases ATP-binding region signature. 878 899 IPR017441 GO:0005524
Cmo05g00706 927 PANTHER SERINE-THREONINE PROTEIN KINASE 59 918 - -
Cmo05g00706 927 SUPERFAMILY Protein kinase-like (PK-like) 860 907 IPR011009 -
Cmo05g00706 927 SUPERFAMILY CAD & PB1 domains 85 174 - -
Cmo05g00706 927 Gene3D Phosphorylase Kinase; domain 1 849 926 - -
Cmo05g00706 927 MobiDBLite consensus disorder prediction 839 854 - -
Cmo05g00706 927 MobiDBLite consensus disorder prediction 735 762 - -
Cmo05g00706 927 SMART PB1_new 83 168 IPR000270 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00706 Cmo12g01014 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00706 Cmo-Chr5:3625543 Cmo10g00526 Cmo-Chr10:2390091 5.13E-19 dispersed
Cmo12g01014 Cmo-Chr12:9478314 Cmo05g00706 Cmo-Chr5:3625543 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00706 - - cmax:111492314 1763.81