Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00745 ATGGTGGGTGAGGTGGCAATGGAGAAGAATAAGAAGAACAAATTTGAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAGTTCCTCTCATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACAAATCTCTGTTATTGTCCCGACAAGAACTCTCATTGTCGTCCATGATTCCCTCCTCGTTTCTCAGCTTCAAATCGTGAAAGCACTAAATGAAGCAAGATTGGAGGCAAAGGTACAATTAAAAGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGGTTGCTTCTAACAGCATCCTTTTTGAAGTATGTCTACCACCCATTGCGGTGGCTGGCCGTCGCTGCGGTCGCCGCCGGCATCTTTCCCATTCTCCTAAAAGCCATTTCCGCCGTTCGCCATCTGAGGATCGATGTCAACATTCTTGCCATTATTGCGGTGGTGGGGACAATGAGTATGAATGACTACATGGAAGCTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCGAATGCTGCAATGTGGTCGCTGATGAGCCTGGCCCCTCAAAAGGCCACCATAGCTGAAACTGGAGAGGTTGTGGAGGTAAAAGAGGTGACATTGAAGAGTGTGTTGGCAGTGAAGGGTGGTGAAGTTATTCCCATTGATGGCATTGTTGTGGATGGAAAATGTGATGTTGATGAGAAATCTTTGACGGGAGAGACTTTCCCAGTTCCCAAACTTAAAGATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTATATTAGTGTTCAAACCACTGCTGTTGCTGAGGACTGCGTGGTGGCAAAGATGGCTGAGTTTGTAGAAGAAGCTCAAAACAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACTCCAGCTGTAGTTGTCATATCAGCTTGTGTAGCAGCCATTCCAGCTGCATTCAGAGTTCACAATCTCAGCCACTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACGAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACAGGCACAATCACTAGAGGTGAATTTGTGGTAACAGATTTTCAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCAAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTACTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCAGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAAGTACAAAAATTGCTGCCCGAGCTGGCTGCTCGTCAGCTATGAAGTTAGAGGAGGAAATGAAACCAGGCCAAACCCTTGGATATGTATTTTGTGAGGAGATGGCTGTGGGATCCTTTGGTCTTTCGGATTCTTGTCGGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTCTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAGTGCAGCTGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTAATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATATGATAAAAGAATTCAAAAGGGATTATGGAGCAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCAGGTTCACCTCTCGCTACTCAAACTGGGAATGTCATCTTAATGTCAAATGACATCACCAAAATCCCACAAGCCATCAAATTAGCAAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCACTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGCCTATTGGTCATCTTGAACAGCATGCTTCTCTTGAGAGGAAGTGATCATAAACATGGGAACAAATGTTGCAAATCTTCCAAGCTATGCTCGACGAAACATGGACGATGCGATGGCAGTAACACTCGACCGTCTCATCATCATCATCACGATCATCATCACCATGATCATCGATGCCATGTCATCGATGATAAATCGCCTAGTCGAGATAATCACAATGGAGATTGTGGGGATAAATTTCATCACAATCGTTCAAATCAATGTGAGAAAACCCCACTTGAGAAAGACAACAATGGGAATTGTTCAAAGAAAGTGGGTGAACCCAATTGTAATTGCCACTCACATCATGTAGCTATCGACATACATCAAGGTATTGACTGTGAGAGAATAGAGAAGCAATAA 2475 45.13 MVGEVAMEKNKKNKFERSHFDVLGICCSSEVPLIENILKPLEGIKQISVIVPTRTLIVVHDSLLVSQLQIVKALNEARLEAKVQLKGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAVRHLRIDVNILAIIAVVGTMSMNDYMEAGSIVFLFSIAEWLESRASHKANAAMWSLMSLAPQKATIAETGEVVEVKEVTLKSVLAVKGGEVIPIDGIVVDGKCDVDEKSLTGETFPVPKLKDSLVWAGTINLNGYISVQTTAVAEDCVVAKMAEFVEEAQNNKSKTQRFIDECAKYYTPAVVVISACVAAIPAAFRVHNLSHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTDFQALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSTDIKPEKVEEFENFPGEGVRGKIDGKDIYIGSTKIAARAGCSSAMKLEEEMKPGQTLGYVFCEEMAVGSFGLSDSCRSGAKEGMEELKSLGIKTAMLTGDCSAAAMHAQQQLENAVDVIHSELLPKEKANMIKEFKRDYGATAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSITTKIAILGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLRGSDHKHGNKCCKSSKLCSTKHGRCDGSNTRPSHHHHHDHHHHDHRCHVIDDKSPSRDNHNGDCGDKFHHNRSNQCEKTPLEKDNNGNCSKKVGEPNCNCHSHHVAIDIHQGIDCERIEKQ 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3933660 3938163 - CmoCh05G007450.1 Cmo05g00745 382880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00745 824 SFLD Haloacid Dehalogenase 380 651 - -
Cmo05g00745 824 SUPERFAMILY Calcium ATPase, transduction domain A 212 297 IPR008250 -
Cmo05g00745 824 MobiDBLite consensus disorder prediction 748 769 - -
Cmo05g00745 824 Gene3D - 390 650 IPR023214 -
Cmo05g00745 824 SUPERFAMILY HAD-like 396 700 IPR036412 -
Cmo05g00745 824 SUPERFAMILY HMA, heavy metal-associated domain 14 82 IPR036163 GO:0046872
Cmo05g00745 824 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 702 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cmo05g00745 824 Gene3D - 409 530 IPR023299 GO:0000166
Cmo05g00745 824 SFLD p-type atpase 380 651 IPR044492 -
Cmo05g00745 824 Pfam E1-E2 ATPase 200 376 - -
Cmo05g00745 824 Gene3D - 11 85 - -
Cmo05g00745 824 Gene3D - 186 301 - -
Cmo05g00745 824 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 677 IPR023298 -
Cmo05g00745 824 Pfam haloacid dehalogenase-like hydrolase 394 613 - -
Cmo05g00745 824 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 8 724 - -
Cmo05g00745 824 PRINTS P-type cation-transporting ATPase superfamily signature 247 261 - -
Cmo05g00745 824 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Cmo05g00745 824 PRINTS P-type cation-transporting ATPase superfamily signature 544 554 - -
Cmo05g00745 824 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Cmo05g00745 824 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Cmo05g00745 824 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 704 - -
Cmo05g00745 824 ProSiteProfiles Heavy-metal-associated domain profile. 17 83 IPR006121 GO:0046872
Cmo05g00745 824 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 172 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo05g00745 824 PANTHER BNAA07G36130D PROTEIN 8 724 - -
Cmo05g00745 824 MobiDBLite consensus disorder prediction 726 769 - -
Cmo05g00745 824 CDD P-type_ATPase_HM 99 701 - -
Cmo05g00745 824 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00745 Cmo10g00412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00508 Cmo-Chr2:2797137 Cmo05g00745 Cmo-Chr5:3933660 8.32E-55 dispersed
Cmo05g00745 Cmo-Chr5:3933660 Cmo10g00412 Cmo-Chr10:1870225 0 dispersed
Cmo05g00742 Cmo-Chr5:3902126 Cmo05g00745 Cmo-Chr5:3933660 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00745 K01534 - csv:101203668 1259.59