Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00748 | ATGGTGGTGAATTTCCAGTGCACTGTTCTTGTGTTTTTGGTGCTTGTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGGTTTGAAGCCACAGCAATGGAATCTAATGAAAAGATCGACCCTACCAGGTTTCAACAATTCAATTCTGTATTTGTTAGTGGTTGTGTATGTTTTGTCTTTGTCATTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAGTAAACACGACATGCTTCTTGGAATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTACAAGCATCTCATCAATGGATTTGCTGTCGACATCACGCCCGAACAGGCAGAGACTCTAAGACATACACCAATTGTAAAATCTGTTGAGAGGGACTGGAAGGTCAGAAAACTAACAACACACACGCCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGCGGTGGCTTTGACAGAGCTGGAGAGGACATTGTGATTGGATTTGTGGACTCCGGGATTTATCCACATCATCCAAGTTTTGCAACATATAATACCGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGTGAAGTAGACCCTGACACTAAGAAGGAATTTTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCAGCTATTCATTTTGAATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCTGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGGGGATTTGTTGCTGATGTAGTAGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGACGACAGAAGATACAAAAACCATCTGACGCTTGGTAATGGAAAAATTTTGGCTGGACTTGGTTTATCACCTGCTACACATTTTAATCGGACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTATCGAAGTACAGCCCTTCAGACTGCCAAAGGCCTGACGTTCTAAACAAACGTTTGGTTGAAGGAAAAGTTCTTCTTTGTGGATATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTTTCTCAAACAGCAAGAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGATCTAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACGCCCAGAGACTGGACCGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGAACCGACGAGCCGAACTATGTTGGAGAGGGATTCGCTATGATTTCTGGAACCAGCATGGCAGCACCGCATATAGCTGGTATATCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCTTTGATGACAACTTCAACAACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAGTTTTCTGAAACAGAAGCCATGAAACTGGTATCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCTGCACTGGATCCGGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACGGCGGGTATCAATGTTCACGAGATACACAACCACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAACCTCAACACCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAGTCCTCCAGCAATGACATTACGATCCGGTTCATCGAGAAAATTCTCAGTAACTCTAACGGCTCGATCACTGACCGGAACCTATAGTTTTGGCGAGGTTCTATTGAAGGGCAGTCGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA | 2508 | 44.34 | MVVNFQCTVLVFLVLVVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESNEKIDPTRFQQFNSVFVSGCVCFVFVIEIVTSYARHLESKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITPEQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKEFCNGKIVGAQHFAEAAKAAGAFNPAIHFESPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHFNRTYTLVAANDVLLDSSVSKYSPSDCQRPDVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTARALGAAGFVLAVENISPGSKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGISALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNHTNSPCNFTMGHPWNLNTPSITIAHLVGTKTVTRTVTNVAEEETYTITARMDPAIAIETSPPAMTLRSGSSRKFSVTLTARSLTGTYSFGEVLLKGSRGHKVRIPVVAMGYQR | 835 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3956217 | 3962371 | - | CmoCh05G007480.1 | Cmo05g00748 | 382883 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00748 | 835 | CDD | Peptidases_S8_3 | 148 | 651 | IPR034197 | - | |
Cmo05g00748 | 835 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 74 | 147 | IPR037045 | - | |
Cmo05g00748 | 835 | Pfam | Fibronectin type-III domain | 737 | 829 | IPR041469 | - | |
Cmo05g00748 | 835 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 177 | 188 | IPR023827 | - | |
Cmo05g00748 | 835 | Pfam | Subtilase family | 172 | 653 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo05g00748 | 835 | SUPERFAMILY | Subtilisin-like | 147 | 696 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo05g00748 | 835 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 141 | 692 | - | - | |
Cmo05g00748 | 835 | Pfam | Peptidase inhibitor I9 | 24 | 145 | IPR010259 | - | |
Cmo05g00748 | 835 | Gene3D | Peptidase S8/S53 domain | 174 | 705 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo05g00748 | 835 | SUPERFAMILY | Protease propeptides/inhibitors | 104 | 145 | - | - | |
Cmo05g00748 | 835 | Gene3D | - | 709 | 832 | - | - | |
Cmo05g00748 | 835 | PRINTS | Subtilisin serine protease family (S8) signature | 172 | 191 | IPR015500 | - | |
Cmo05g00748 | 835 | PRINTS | Subtilisin serine protease family (S8) signature | 614 | 630 | IPR015500 | - | |
Cmo05g00748 | 835 | PRINTS | Subtilisin serine protease family (S8) signature | 251 | 264 | IPR015500 | - | |
Cmo05g00748 | 835 | PANTHER | CUCUMISIN-RELATED | 14 | 834 | - | - | |
Cmo05g00748 | 835 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 615 | 625 | IPR023828 | - | |
Cmo05g00748 | 835 | Gene3D | - | 387 | 552 | - | - | |
Cmo05g00748 | 835 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 14 | 834 | IPR045051 | - | |
Cmo05g00748 | 835 | CDD | PA_subtilisin_like | 394 | 532 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g00748 | Cmo12g00913 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00748 | Cmo-Chr5:3956217 | Cmo07g00039 | Cmo-Chr7:270776 | 0 | dispersed | |
Cmo16g00602 | Cmo-Chr16:2939824 | Cmo05g00748 | Cmo-Chr5:3956217 | 4.76E-07 | transposed | |
Cmo12g00913 | Cmo-Chr12:8405049 | Cmo05g00748 | Cmo-Chr5:3956217 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00748 | - | - | csv:101219351 | 1540.01 |