Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00748 ATGGTGGTGAATTTCCAGTGCACTGTTCTTGTGTTTTTGGTGCTTGTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGGTTTGAAGCCACAGCAATGGAATCTAATGAAAAGATCGACCCTACCAGGTTTCAACAATTCAATTCTGTATTTGTTAGTGGTTGTGTATGTTTTGTCTTTGTCATTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAGTAAACACGACATGCTTCTTGGAATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTACAAGCATCTCATCAATGGATTTGCTGTCGACATCACGCCCGAACAGGCAGAGACTCTAAGACATACACCAATTGTAAAATCTGTTGAGAGGGACTGGAAGGTCAGAAAACTAACAACACACACGCCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGCGGTGGCTTTGACAGAGCTGGAGAGGACATTGTGATTGGATTTGTGGACTCCGGGATTTATCCACATCATCCAAGTTTTGCAACATATAATACCGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGTGAAGTAGACCCTGACACTAAGAAGGAATTTTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCAGCTATTCATTTTGAATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCTGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGGGGATTTGTTGCTGATGTAGTAGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGACGACAGAAGATACAAAAACCATCTGACGCTTGGTAATGGAAAAATTTTGGCTGGACTTGGTTTATCACCTGCTACACATTTTAATCGGACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTATCGAAGTACAGCCCTTCAGACTGCCAAAGGCCTGACGTTCTAAACAAACGTTTGGTTGAAGGAAAAGTTCTTCTTTGTGGATATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTTTCTCAAACAGCAAGAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGATCTAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACGCCCAGAGACTGGACCGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGAACCGACGAGCCGAACTATGTTGGAGAGGGATTCGCTATGATTTCTGGAACCAGCATGGCAGCACCGCATATAGCTGGTATATCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCTTTGATGACAACTTCAACAACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAGTTTTCTGAAACAGAAGCCATGAAACTGGTATCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCTGCACTGGATCCGGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACGGCGGGTATCAATGTTCACGAGATACACAACCACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAACCTCAACACCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAGTCCTCCAGCAATGACATTACGATCCGGTTCATCGAGAAAATTCTCAGTAACTCTAACGGCTCGATCACTGACCGGAACCTATAGTTTTGGCGAGGTTCTATTGAAGGGCAGTCGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2508 44.34 MVVNFQCTVLVFLVLVVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESNEKIDPTRFQQFNSVFVSGCVCFVFVIEIVTSYARHLESKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITPEQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKEFCNGKIVGAQHFAEAAKAAGAFNPAIHFESPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHFNRTYTLVAANDVLLDSSVSKYSPSDCQRPDVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTARALGAAGFVLAVENISPGSKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGISALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNHTNSPCNFTMGHPWNLNTPSITIAHLVGTKTVTRTVTNVAEEETYTITARMDPAIAIETSPPAMTLRSGSSRKFSVTLTARSLTGTYSFGEVLLKGSRGHKVRIPVVAMGYQR 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3956217 3962371 - CmoCh05G007480.1 Cmo05g00748 382883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00748 835 CDD Peptidases_S8_3 148 651 IPR034197 -
Cmo05g00748 835 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 74 147 IPR037045 -
Cmo05g00748 835 Pfam Fibronectin type-III domain 737 829 IPR041469 -
Cmo05g00748 835 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 177 188 IPR023827 -
Cmo05g00748 835 Pfam Subtilase family 172 653 IPR000209 GO:0006508|GO:0008236
Cmo05g00748 835 SUPERFAMILY Subtilisin-like 147 696 IPR036852 GO:0004252|GO:0006508
Cmo05g00748 835 ProSiteProfiles Serine proteases, subtilase domain profile. 141 692 - -
Cmo05g00748 835 Pfam Peptidase inhibitor I9 24 145 IPR010259 -
Cmo05g00748 835 Gene3D Peptidase S8/S53 domain 174 705 IPR036852 GO:0004252|GO:0006508
Cmo05g00748 835 SUPERFAMILY Protease propeptides/inhibitors 104 145 - -
Cmo05g00748 835 Gene3D - 709 832 - -
Cmo05g00748 835 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Cmo05g00748 835 PRINTS Subtilisin serine protease family (S8) signature 614 630 IPR015500 -
Cmo05g00748 835 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cmo05g00748 835 PANTHER CUCUMISIN-RELATED 14 834 - -
Cmo05g00748 835 ProSitePatterns Serine proteases, subtilase family, serine active site. 615 625 IPR023828 -
Cmo05g00748 835 Gene3D - 387 552 - -
Cmo05g00748 835 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 834 IPR045051 -
Cmo05g00748 835 CDD PA_subtilisin_like 394 532 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00748 Cmo12g00913 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00748 Cmo-Chr5:3956217 Cmo07g00039 Cmo-Chr7:270776 0 dispersed
Cmo16g00602 Cmo-Chr16:2939824 Cmo05g00748 Cmo-Chr5:3956217 4.76E-07 transposed
Cmo12g00913 Cmo-Chr12:8405049 Cmo05g00748 Cmo-Chr5:3956217 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00748 - - csv:101219351 1540.01