Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00770 ATGGCTTCCACTGCCCTTCTTTCTCTCTCTACAATGCTCCTTGTTTCTCTTGTTACCAAGTTCATATTCCCCATGTCTCCAATTGCTTTTGGAGTCACCATCTTCCTTGCTCCTCTTCTTACTTACATCATCTCTCCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCCTTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAACGACCTCAACCACCGCCTTCTCGCTTCCTTGTGCAACACATTCGGCTCCATATTCCTCTTGAAGCTCGGCTCCAAGAACCTCGTTGTCGTGTCGGATGCCGAGCTTGCTAGCCAAGTTCTCCACGCTCAGGGCGTTGAGTTTGGCTCTCGTCCTCGAAACGTCGTGTTCGACATCTTCACTGGAAATGGTCAGGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACGTTGCCGTTCTTCACGAACAAGGTGGTGCATAACTACAGTGGCATGTGGGAGGATGAGATGGACTCTGTGGTTGGTGATTTAAGGAGTAGTAAGAAGTTTCAATCCGAGGGGATAGTTATTAGAAAGCGTTTGCAGTTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAGGACGATCCTTTGTTCATTGAAGCGACTCGATTCAACTCGGAAAGGAGTCGATTGGCGCAGAGCTTTGAGTACAACTATGGAGATTTCATTCCTTTGCTTAGACCCTTCTTGCGGGGCTATTTGAACAGGTGCAGGGATTTGCAGGGTCGGAGGTTGGACTTTTTCAACAAAAACTACGTCGAGAAGCGAAGGAAGATAATGGGTGCCAATGGAGATAAGCACAAGATAAGTTGTGCCATGGATCATATCATAGACGCTCAGTTGAAAGGTGAGATAAGTGAAGAGAACGTGATTTACATCGTAGAGAACATCAACGTGGCAGCGATAGAAACGACATTGTGGTCGATGGAATGGGCAATAGCGGAGTTGGTGAATCATCCAGACATCCAACACAAGATTCGGGAGGAGCTAAAAAATGTCCTAGAGGGAAAGGAAGTAACTGAATCCAACCTTCATGAACTGCCATACTTACAAGCAACAGTGAAAGAGACGCTGCGGTTGCACACTCCAATACCGTTGTTGGTGCCACATATGAACTTGGAAGAAGCAAAGCTGGGAGGGTACACCATCCCAAAGGAGTCGAAGGTGGTGGTGAATGCATGGTGGCTGGCAAACAACCCCGAGTGGTGGAAGAATCCTGAAGAGTTCAGGCCAGAGAGGTTCTTTGAGGAAGAAAGTGGGACGGAAGCTGTTGCTGCAGGGAAGGTGGATTATCGGTTCTTACCATTTGGAGTTGGAAGGAGGAGTTGCCCTGGAATTGTGTTGGCAATGCCAATCTTAGGGCTCATCCTTGCCAAATTGGTATCCAAGTTTGAAATGAAGCCTCCAAGTGGGATGGAGAAGGTCGACGTGACCGAGAAGGGAGGTCAATTCAGTTTGCATATTGCCAACCACTCCACTGTTGTTTTCAACCCCATAATGGCTTAA 1581 47.44 MASTALLSLSTMLLVSLVTKFIFPMSPIAFGVTIFLAPLLTYIISPMAFSSKLPPGPLSLPIFGNWLQVGNDLNHRLLASLCNTFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDSVVGDLRSSKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNRCRDLQGRRLDFFNKNYVEKRRKIMGANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPDIQHKIREELKNVLEGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLILAKLVSKFEMKPPSGMEKVDVTEKGGQFSLHIANHSTVVFNPIMA 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4362984 4365126 - CmoCh05G007700.1 Cmo05g00770 382905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00770 526 SUPERFAMILY Cytochrome P450 54 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 Gene3D Cytochrome P450 48 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 7 525 - -
Cmo05g00770 526 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 PANTHER OS02G0467000 PROTEIN 7 525 - -
Cmo05g00770 526 Pfam Cytochrome P450 54 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo05g00770 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00692 Cmo-Chr2:4371550 Cmo05g00770 Cmo-Chr5:4362984 0 dispersed
Cmo05g00770 Cmo-Chr5:4362984 Cmo20g00331 Cmo-Chr20:1614881 0 dispersed
Cmo12g00931 Cmo-Chr12:8654799 Cmo05g00770 Cmo-Chr5:4362984 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00770 K00487 - csv:105434566 987.252