Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00859 | ATGGGGTCCTGCTTGTCTGCGGAAAGCAGGAGCCCCATTCCTGGTTCCCCAAACACTCCGGCTAAGCACCGTCGGAGCAAGAACAGTTCTAAGAGGCGAAATGTTTCTCGAAATTCCTCCTTTGGGGATTCGTCACTTCATCGGATCCCCGGCAGGCTGTTCGGCAATGGTGCCACTGATGTGGCTTCTCTGTTCACGCAGCAGGGAAAGAAAGGGACCAATCAAGATGCCATGATTGTCTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCGAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTCAACTTGACCACAGATGATGTTCATAGAGAGATCAGCCTTAATGCATCAAGTGTAAACTCAGACGAAACAACCTCCTTTTTGTCTGCTAATGAGGAGTTCAAGGCCTCCACCGATCTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTTTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAGCTCAGAATGCACCAAACCATAGATTGCATCTGTAGTGGCACTACAGCAGTGACTTTCGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCCGTTTTGGGTATGAGAGATAAAGATGACTCTCTTGTTGCTATTCAATTGACTGTGGATCTTAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAAAGGTCGTATCTTTGCTCTCCAAGACGAACCTGATGTTGCTCGAGTCTGGCTTCCAGACAGCAACTCTCCTGGACTTGCCATGGCGCGGGCGTTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCTGAAATATCATATCGACGACTCACGGAAAAAGACGAATTCATTGTTCTGGCTTCAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTCGTAGATATTGTTGCATCAGCTCGAAAACGTACTACTGCAGCTCGAACTCTGGTGGAGACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCTAAGATGGATGACTGTGCGGTCATTTGCCTCTTCCTTGACTCAAACTCCAGCAATCCATCATCTGCTTCCAATAACAAACTGGATGAGCAACAAAGCTTAGTAGATCAAGTCAGTACAGCAGTTGTGGTTGAAAATCTCTGTGGCCCAAATGGTCTGAATCGTTCAGGAACCATCAAAACGAGCAAGAACATTTTGCAGGATGGAAGCGAAGAAGAAGAAGATGAATGGAAGGAGGAAGAACAGTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGGGTCTCGCGCGTAAACACTCTGGTAAACCTGCCGAGATTCGATCCTGGAAAAGAAGGTAAGGCCAGCCGGAAGTGA | 1458 | 46.5 | MGSCLSAESRSPIPGSPNTPAKHRRSKNSSKRRNVSRNSSFGDSSLHRIPGRLFGNGATDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREISLNASSVNSDETTSFLSANEEFKASTDLDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDCICSGTTAVTFVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRKCKGRIFALQDEPDVARVWLPDSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLASDGIWDVLSNKEVVDIVASARKRTTAARTLVETAIKAWKHKYPTSKMDDCAVICLFLDSNSSNPSSASNNKLDEQQSLVDQVSTAVVVENLCGPNGLNRSGTIKTSKNILQDGSEEEEDEWKEEEQSEMGIEWSALEGVSRVNTLVNLPRFDPGKEGKASRK | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5570993 | 5574848 | + | CmoCh05G008590.1 | Cmo05g00859 | 382994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00859 | 485 | ProSiteProfiles | PPM-type phosphatase domain profile. | 61 | 380 | IPR001932 | - | |
Cmo05g00859 | 485 | Gene3D | - | 58 | 382 | IPR036457 | - | |
Cmo05g00859 | 485 | SMART | PP2C_4 | 51 | 378 | IPR001932 | - | |
Cmo05g00859 | 485 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cmo05g00859 | 485 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Cmo05g00859 | 485 | MobiDBLite | consensus disorder prediction | 426 | 450 | - | - | |
Cmo05g00859 | 485 | PANTHER | PROTEIN PHOSPHATASE 2C 33-RELATED | 1 | 469 | - | - | |
Cmo05g00859 | 485 | Pfam | Protein phosphatase 2C | 134 | 359 | IPR001932 | - | |
Cmo05g00859 | 485 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 469 | - | - | |
Cmo05g00859 | 485 | CDD | PP2Cc | 61 | 380 | IPR001932 | - | |
Cmo05g00859 | 485 | SUPERFAMILY | PP2C-like | 61 | 381 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00117 | Cmo-Chr2:615738 | Cmo05g00859 | Cmo-Chr5:5570993 | 1.08E-146 | dispersed | |
Cmo03g00330 | Cmo-Chr3:4439194 | Cmo05g00859 | Cmo-Chr5:5570993 | 2.31E-108 | dispersed | |
Cmo05g00859 | Cmo-Chr5:5570993 | Cmo08g00081 | Cmo-Chr8:420886 | 5.53E-167 | dispersed | |
Cmo07g01285 | Cmo-Chr7:7102504 | Cmo05g00859 | Cmo-Chr5:5570993 | 9.42E-111 | dispersed | |
Cmo01g01764 | Cmo-Chr1:13087240 | Cmo05g00859 | Cmo-Chr5:5570993 | 3.88E-90 | transposed | |
Cmo11g00953 | Cmo-Chr11:5012030 | Cmo05g00859 | Cmo-Chr5:5570993 | 6.28E-174 | transposed | |
Cmo16g01053 | Cmo-Chr16:7378460 | Cmo05g00859 | Cmo-Chr5:5570993 | 8.50E-165 | transposed | |
Cmo01g00519 | Cmo-Chr1:2498314 | Cmo05g00859 | Cmo-Chr5:5570993 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00859 | - | - | csv:101222150 | 809.29 |