Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00901 ATGGCGGCGAAGCCCAACTCGGTTTCCTTCAGGGTTCCGTACAGGAACATCCATGATGCAGAAGTGGAGATGGTGGCTGTCGATGAACAGCAGCTTCAAGGGATCGATCTCAATTCTCCTCCTTCTGATGGATTTCCTAATGGAAGCCCAGACAGTTCATCGTCAGCGCCTCATGTTAGATCTACGCCCAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCCTACTAACGCCATATATTCAGACACTCGGAATTGAGCATGCGTTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGGCTCGTGGTTCAACCATGTGTCGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACGTTGGATATATACTAGGAGACACGAACGAACACTGCAGTGTATACAAAGGTACACGAATGAGGGCGGCTATTATATTTGTAATAGGCTTTTGGTTGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTGTCAGGTCCTGATCAACACAATATTGCAAATGCGGTATTTTGTTCATGGATGGCTGTCGGTAATATCCTAGGTTTTTCGGCAGGAGCTAACGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTAATGCTTGCTGTGAAGCCTGTGCGAACCTTAAGGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCGACGAAGTTCCACTTACTGCTGTAGATCAACCGCCACGTTTATCAGATTCTGCTCCTCTGTTGAACGGGAATGAACAAAATTGTCCTGATATTTTAAAACCAGAACTTAACAGTTTGAATGGGAGCAATGTTGAGTATGGATATCAAGAAAATAGGAATTTGAAAGATTCAAAATCAAAAATTGAGGAGAATCACAGCGAAGGGTATTATGATGGTCCTGCAACAGTGGTAGTTAAATTATTGACCAGTTTAAGACATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTTGACACGGATTGGATGGGAAGGGAAGTGAACCATGGGGACCCAAAAGGCAGTTTGACTGACAAACAGGTTTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTCTTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATAGAGCCAATGTGTCAGCGAATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATGGTGTTTGCATGCATGACGGCAACTACTATTATCAGTTTAATATCCGTCAGTCAGTACTCTGAAGGAGTCGAGCACGTTATCGGGGGAAATTCATCAATAAAAAATGCTGCCTTGGCTGTTTTTACTCTTCTTGGTTTTCCACTCGCTATAACATATAGTGTTCCCTTCTCTTTGACAGCAGAATTGACGGCTGATTCTGGTGGTGGGCAAGGATTGGCTATAGGTGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCCCTGGGAGCTGGGCCATGGGATGCATTATTCAATGGAGGAAACATTCCTGCATTTGCTTTGGCGTCTATATGTGCTCTCGCGGCTGGAATTGTTGCAGTTCTTAGATTGCCTAATCAAACCAACCGCTCTTTCAAATCCACAGTGAACCAAATAATTCCTGGAGTAGCTCTTAGAAGCCTGGATGATCTCATAGTACCGTATACCTTCATTTAA 1869 43.34 MAAKPNSVSFRVPYRNIHDAEVEMVAVDEQQLQGIDLNSPPSDGFPNGSPDSSSSAPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADVGYILGDTNEHCSVYKGTRMRAAIIFVIGFWLLDLANNTVQGPARALLADLSGPDQHNIANAVFCSWMAVGNILGFSAGANGNWHKWFPFLLSNACCEACANLKAAFLVAVLFLTICTLVTIYFADEVPLTAVDQPPRLSDSAPLLNGNEQNCPDILKPELNSLNGSNVEYGYQENRNLKDSKSKIEENHSEGYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVNHGDPKGSLTDKQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFMVFACMTATTIISLISVSQYSEGVEHVIGGNSSIKNAALAVFTLLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFNGGNIPAFALASICALAAGIVAVLRLPNQTNRSFKSTVNQIIPGVALRSLDDLIVPYTFI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6793450 6799493 + CmoCh05G009010.1 Cmo05g00901 383036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00901 622 Gene3D MFS general substrate transporter like domains 62 588 IPR036259 -
Cmo05g00901 622 PANTHER SUGAR TRANSPORTER 49 600 - -
Cmo05g00901 622 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 49 600 - -
Cmo05g00901 622 Pfam MFS/sugar transport protein 83 215 - -
Cmo05g00901 622 MobiDBLite consensus disorder prediction 37 58 - -
Cmo05g00901 622 CDD MFS_SLC45_SUC 69 586 - -
Cmo05g00901 622 SUPERFAMILY MFS general substrate transporter 68 595 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00901 Cmo-Chr5:6793450 Cmo12g00675 Cmo-Chr12:4526412 0 dispersed
Cmo05g00901 Cmo-Chr5:6793450 Cmo01g00506 Cmo-Chr1:2439390 2.43E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00901 K15378 - csv:101205348 1084.71