Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00921 | ATGTCGATCTCTTCTTCCGATGACTGCTTTATTGACTCTCATTTACTCTGTGACGAGGACTCCTCCGATATTTTGTCCGGAGAGTCGCCAGAGTACTCCTCGGACCTTGAATCGCCTGCCAGTAGTGAGGATTCTATTGCTAGTTTCATAGAGGATGAGAGGCACTTCGTTCCTGGGATTGATTACTTGTCGCGCTTTCACTCTCAATCGCTCGATTCCTCCGCAAGAGCTGACTCTGTTGCATGGATTCTCAAGGTTCAAGCATATTACGGTTTTCAACCACTCACTGCATACCTTTCCGTCAATTACTTGGATCGATTCCTTTATTCTCGCCGCTTGCCGGAAACAAATGGGTGGCCATTGCAGCTTCTATCAGTGGCTTGTTTGTCACTTGCAGCTAAAATGGAGGAACCACTTGTTCCTTCGTTCCTGGATCTCCAGATCGAAGGAGCAAAATATATATTTGAACCTAGAACAATACGTAGGATGGAGCTTCTTGTGCTTACAACATTGGATTGGCGGCTCCGATCCGTAACCCCCTTCAGCTTCATCGGATTCTTCGCCTACAAAGTCGATCCCACCGGAACATTTTCCAGTTTTCTTATCTCACGCTCCACAGAAATCATTCTCTCCAATATTCGAGGTGACGCAAGCTTTCTTGAGTACTGGCCTTCCTGCATTGCTGCCGCAGCCTTACTTTGTGCGGCAAATGAAATACCCAATTTGACCCTTCTCAATCCTGAACATGCAGAGTCTTGGTGCAATGGACTCAGCAAAGATAAAATTGTCGGGTGTTATCGACTAATGCAGCCGTTAACATCGGAGAGTGGTCGTAGAAAGCCCCCGAAAGTGATACCGCAACTCCGAGTGAGAATCCGAGCTGGGTTGAGGTACAGCAACTCGTCGTCGTCGTTGTCATCAACAAGGTTAGGTTATAAAAGGAGGAAGTTGAATAATTGCTTGTGGGTAGAAGAAGATGACAAAGAAAATTCCAAGTTTAGAGCAGAGGAATAA | 1014 | 46.15 | MSISSSDDCFIDSHLLCDEDSSDILSGESPEYSSDLESPASSEDSIASFIEDERHFVPGIDYLSRFHSQSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSRRLPETNGWPLQLLSVACLSLAAKMEEPLVPSFLDLQIEGAKYIFEPRTIRRMELLVLTTLDWRLRSVTPFSFIGFFAYKVDPTGTFSSFLISRSTEIILSNIRGDASFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAESWCNGLSKDKIVGCYRLMQPLTSESGRRKPPKVIPQLRVRIRAGLRYSNSSSSLSSTRLGYKRRKLNNCLWVEEDDKENSKFRAEE | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7189219 | 7191423 | - | CmoCh05G009210.1 | Cmo05g00921 | 383056 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00921 | 337 | Pfam | Cyclin, N-terminal domain | 46 | 175 | IPR006671 | - | |
Cmo05g00921 | 337 | CDD | CYCLIN | 76 | 168 | IPR013763 | - | |
Cmo05g00921 | 337 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
Cmo05g00921 | 337 | SUPERFAMILY | Cyclin-like | 39 | 175 | IPR036915 | - | |
Cmo05g00921 | 337 | SMART | Cyclin_C_2 | 178 | 307 | IPR004367 | - | |
Cmo05g00921 | 337 | SUPERFAMILY | Cyclin-like | 160 | 274 | IPR036915 | - | |
Cmo05g00921 | 337 | Gene3D | - | 59 | 176 | - | - | |
Cmo05g00921 | 337 | SMART | cyclin_7 | 81 | 169 | IPR013763 | - | |
Cmo05g00921 | 337 | PANTHER | CYCLINS | 24 | 318 | IPR039361 | - | |
Cmo05g00921 | 337 | Pfam | Cyclin, C-terminal domain | 178 | 280 | IPR004367 | - | |
Cmo05g00921 | 337 | ProSitePatterns | Cyclins signature. | 76 | 107 | IPR006671 | - | |
Cmo05g00921 | 337 | PANTHER | CYCLIN-D1-1 | 24 | 318 | - | - | |
Cmo05g00921 | 337 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Cmo05g00921 | 337 | Gene3D | - | 48 | 240 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00312 | Cmo-Chr4:1547610 | Cmo05g00921 | Cmo-Chr5:7189219 | 1.84E-156 | dispersed | |
Cmo04g01665 | Cmo-Chr4:8468889 | Cmo05g00921 | Cmo-Chr5:7189219 | 1.82E-143 | dispersed | |
Cmo05g00557 | Cmo-Chr5:2692406 | Cmo05g00921 | Cmo-Chr5:7189219 | 9.56E-51 | dispersed | |
Cmo05g00921 | Cmo-Chr5:7189219 | Cmo16g00330 | Cmo-Chr16:1507017 | 4.33E-57 | dispersed | |
Cmo12g00652 | Cmo-Chr12:4203093 | Cmo05g00921 | Cmo-Chr5:7189219 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00921 | K18810 | - | csv:101210686 | 600.897 |