Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00988 ATGGTTTTGGGATTCATTTCTTTACTCTTAACATTCGGACAAAACTATATTGCTGAAGTTTGCATACCCTCAAGGTATGCAAATACCATGTTGCCTTGCCCTTATAGAGGGAAATCACATCAAAGCTCCCATGGCATCGAACCCGAAGAACACGAGGAAGACGCCCACGATCACCACCGTAGGCTTCTTTGGTACGAGCATCGACGTCTCGGCGGTGGTGGTCACGTAGAAAGTTGCAAACCAGGATATATGCAACTTATATCTCTAAATGGTTTGCATCAATTACATATCTTCATCTTCTTTCTAGCCGTTCTCCATGTTGTCTTTAGCGGCATAACGATGACTCTCGGAAGATTGAAAATTCGTGGATGGAAAGTATGGGAAAGACAGACTGAACTAGAACATGAAGCCATGAACGATCCTACAAGGTTCCGACTTACTCACGAGACATCGTTTGTAAGAGATCACATTAGTAGAGCCGATTACTTGTCTCTTAGACATGGTTTCGTCACGGTTCATTTAGCACCTGGGAGTAAATTTGACTTCCAAAAGTACATCAAAAGGTCATTAGAAGATGACTTCAAGGTGGTCGTCGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTGCTTCTCAATGTTAGTGGGTGGCAAGTTATGCTTTGGGTGTCCATATTTCCTCTGGTGGTGATCCTAGCCGTCGGAACAAAGCTGCAAGGAATCATAACACAAATGGCGCTTGAAATCAAGGAAAGGCACGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCCGATAGACACTTCTGGTTCAGTTGGCCCGTTTTGGTTCTGTATCTCATCCATTACGTCCTCTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGATTGAGATCATGCTTTCACCAAAATTTTGATCTTATTATCGTCAGAGTTGCCCTTGGAAGTGCTTTGAAGAAAAAGAATGAAGGGGGAAAGCCAGATCCAATGCCAATGCGAACACTGGGCGGGGGCGGAGGCGGAGGCAGTGGAAGCCCTCCCGAGTCACCGTCGGAAGACTCGCATGAGTTCCAGCATCATGCAGACCCTCTACGACCACCCAACGACGTCGAAGCCTCCGCTGTTCCTTCGGCCAACATAATTGCCACCGTCGATCTTCAGCAACAGCAGAATTACGCGAACCTCTTGGTAAGAGGGGGAAGGGTTAAGGATTTACTCGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCT 1317 46.01 MVLGFISLLLTFGQNYIAEVCIPSRYANTMLPCPYRGKSHQSSHGIEPEEHEEDAHDHHRRLLWYEHRRLGGGGHVESCKPGYMQLISLNGLHQLHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWERQTELEHEAMNDPTRFRLTHETSFVRDHISRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMLWVSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHQNFDLIIVRVALGSALKKKNEGGKPDPMPMRTLGGGGGGGSGSPPESPSEDSHEFQHHADPLRPPNDVEASAVPSANIIATVDLQQQQNYANLLVRGGRVKDLLGVRYHIVRGTLDAVGVKDRQQGRS 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7954924 7959648 - CmoCh05G009880.1 Cmo05g00988 383123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00988 439 MobiDBLite consensus disorder prediction 329 378 - -
Cmo05g00988 439 PRINTS Ribosomal protein S12 signature 401 418 IPR006032 GO:0003735|GO:0005840|GO:0006412
Cmo05g00988 439 PRINTS Ribosomal protein S12 signature 418 434 IPR006032 GO:0003735|GO:0005840|GO:0006412
Cmo05g00988 439 PRINTS Ribosomal protein S12 signature 434 439 IPR006032 GO:0003735|GO:0005840|GO:0006412
Cmo05g00988 439 SUPERFAMILY Nucleic acid-binding proteins 398 439 IPR012340 -
Cmo05g00988 439 Gene3D - 386 439 IPR012340 -
Cmo05g00988 439 Pfam Mlo family 157 326 IPR004326 GO:0006952|GO:0016021
Cmo05g00988 439 Pfam Mlo family 1 158 IPR004326 GO:0006952|GO:0016021
Cmo05g00988 439 MobiDBLite consensus disorder prediction 361 375 - -
Cmo05g00988 439 PANTHER MLO-LIKE PROTEIN 5-RELATED 1 326 - -
Cmo05g00988 439 PANTHER MLO-LIKE PROTEIN 1 1 326 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00988 Cmo-Chr5:7954924 Cmo07g00374 Cmo-Chr7:1715847 1.99E-153 dispersed
Cmo12g00776 Cmo-Chr12:6188537 Cmo05g00988 Cmo-Chr5:7954924 5.43E-08 dispersed
Cmo05g00988 Cmo-Chr5:7954924 Cmo03g00647 Cmo-Chr3:5880248 6.62E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00988 K08472 - csv:101208890 645.195