Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g01072 ATGGAGGGAGATATCACAACAATCATGGGGATGGTTATATTGCAAGTTTGCTACGCTGGTTTAAGCATTACCTCAAAGCTAGCCATGCAATCAGGAATGAACCCTCTTGTTCTTCTCACTTACAGGCAATTTTTTGGCACTTTGGCCATTGCTCCCTTTGCTTTCTTTACTGAAAGGAAAACAAGGCCAAAGATCACTTTCCCTGTTCTTGTTCAAATCTTTATCTGTTCTTTATCTGGAGCCACAGCGAACCAGATATTCTTCTTTGTTGGGTTGAAATGCACAAACCCAACCGTTTCAAGTGCTATGGCTAATGTTCTTCCTGCTGCTACTTTTATTCTTGCTGTTGTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTCTTGCAAAGGTGATGGGAACAATTGTGTGTGTATGTGGAGCAATGCTGCTATCTTTCTACCATGGACACACCATTGGCTTAGGTGAATCAAAAATTCATTGGCCTTATGTCGAGAGGATCATGAGCAAAACAAACCCGACGAACCGTCAAGAAAACCGAACCCTCGGCTCGGTTTTGTTGCTTTGCAGCTCGTTCTCTTGGGCGTTATGGTTCGTCATTCAAGCAAGATTGAGTGTCAAGTTTAAAGCTCCTTATACAAGTACAACGTTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCCGAGCACAACGTCGCTGCTTGGTCATTGAAAAGTTCGATCCGACTCATCTCGGCTCTTTACACAGGAGTTGTGTGTTCGGGATTGACATTTAGCATCACTTCTTGGATTATACAAAGAAAAGGGCCTCTCTATGTCTCAATTTTCACCCCATTGTTGCTTATAATTGTGGCCATCTTTAGCTGGGCTCTCCTCCACGAACAGCTCTACGTCGGAACTGTTCTTGGCTCGATTTTGATAATCATTGGGCTATATGGAGTGCTATGGGGAAAGTCCAAAGAGATGAAAGTAGAAGAGGAAGAGAAGGTGGAAAAGGCAACAAATGGGAGTCAAAAAGATGACGTGGAATTGCAAATCATAAACATCAAATAA 1077 42.8 MEGDITTIMGMVILQVCYAGLSITSKLAMQSGMNPLVLLTYRQFFGTLAIAPFAFFTERKTRPKITFPVLVQIFICSLSGATANQIFFFVGLKCTNPTVSSAMANVLPAATFILAVVFRQESVRIKTKPGLAKVMGTIVCVCGAMLLSFYHGHTIGLGESKIHWPYVERIMSKTNPTNRQENRTLGSVLLLCSSFSWALWFVIQARLSVKFKAPYTSTTLLCFMAFFQCGLIAVISEHNVAAWSLKSSIRLISALYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIFSWALLHEQLYVGTVLGSILIIIGLYGVLWGKSKEMKVEEEEKVEKATNGSQKDDVELQIINIK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8634436 8637135 + CmoCh05G010720.1 Cmo05g01072 383207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g01072 358 PANTHER WAT1-RELATED PROTEIN 7 351 IPR030184 GO:0016021|GO:0022857
Cmo05g01072 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Cmo05g01072 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Cmo05g01072 358 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Cmo05g01072 358 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Cmo05g01072 358 PANTHER WAT1-RELATED PROTEIN 7 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g01072 Cmo11g01280 CCT
Cmo05g01072 Cmo11g01280 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01072 Cmo-Chr5:8634436 Cmo11g01277 Cmo-Chr11:8407466 2.66E-154 dispersed
Cmo05g01072 Cmo-Chr5:8634436 Cmo18g00829 Cmo-Chr18:9683649 2.00E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g01072 - - csv:101217670 552.747