Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g01081 ATGCAACTACTATCTCCATTTCTCTTGCTCTTCACCCTCTTTAATGCTGCAATAAACTCTACAAGGGCCCTTGACTTTAAAATTCAATCCGTCATTGTTGTTGACAAGTCGGGCAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTCAAGTCAATCCTGGTGTATACAGAGAAAAGGTGACGATCACGTCAAAAAAACCATTCATTTATCTACAAGGAGGTGACCGCAATACAACAATTATCACTTTCAATGACCATCAACAAACAGATACTAGCGCTACATTTAGTTCAATTGCTGATAACATTATTGTGAGAGGCATTACCTTTCAGAACTCCTTCAATCTGGCAAATGCTCCACAATTGTTTGTTCAAAGTGCTGAAACTTTCTATACACAAGCATTAGCTGCAAGAATCTACGGGGACAAATCGGCTTTTATCAGCTGTGGATTCAAGGGATTTCAAGACACATTATGGGATGTAAAAGGCCGTCATTATTTCAAAAGTTGTTACATTGAAGGTGCTATAGATTTCATCTTTGGTAATGGTCAATCAGTTTATGAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGATACATTACTGCACAAGGTCGACAATCCGCAAAAGATCCGAGCGGATTTGTATTTAAACAATGCACCATAATGGGGTCGGGCAAAGCTTTTTTGGGGAGAGCATATGGTCCTTTTTCTAGAGTTGTATTCGAAGATACTAACATGGGGAACGTGGTAGCACCAGAGGGATGGAATGCCTGGAACTTCAGGGGCAAAGAGAAAAATTTTATGTACATCGAGTTGAATAGTAGGGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAAAGACGCAATCAGCCCCTTCCAAAGGGGTTTCATGGGCAAAGACGCAGGGAGCCTCACAACTAAACAGCTACTCCGTGGAATCCTTCATTAACCAAGATGGGTGGATTCCCAAACTCCTTTGA 1044 41.57 MQLLSPFLLLFTLFNAAINSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIVRGITFQNSFNLANAPQLFVQSAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEGCLIYVNVGLLPEVNQGYITAQGRQSAKDPSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSAPSKGVSWAKTQGASQLNSYSVESFINQDGWIPKLL 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8679472 8680935 + CmoCh05G010810.1 Cmo05g01081 383216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g01081 347 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Cmo05g01081 347 Pfam Pectinesterase 32 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00289 Cmo-Chr1:1373009 Cmo05g01081 Cmo-Chr5:8679472 4.55E-50 dispersed
Cmo05g01081 Cmo-Chr5:8679472 Cmo17g00108 Cmo-Chr17:580652 1.09E-87 dispersed
Cmo05g01079 Cmo-Chr5:8670001 Cmo05g01081 Cmo-Chr5:8679472 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g01081 - - cmos:111450826 563.918