Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo05g01140 | ATGGCGGCTTCCACCAAATCTCCTTCCTCTATCGTTCTTGCTGTTCTTCTTGTTCTTCTTTCAGTTCTTGGCTGTCCTTCATCCAAAGCCCATCTACTCAAAACTTGTATGTTCGACGCTATTTACCAACTCGGCGATTCAATTTCCGACACCGGAAATCTCATTCGTCAAAACCCCAACACCCCATTTTCTCATCTTCCTTACGGTGAAACGTTCTTCAACAAATCCACTGGTCGCTGCTCCAATGGTCTTCTTATGATCGATTACTTTGCTTTGGATGCTGGACTTCCCTTGGTGAACCCTTATTTGAACAAAGATGCATCGACAAGGCATGGTGTGAATTTCGCAGTGGCTGGTTCTACGGCTTTGTCTTCTCAACTTCTTTCTCAAAACCAAATCTTGTCTCCGGTCACCAACTCTTCTCTCAACCAACAACTTTATTGGATGTTCTCTCATTTCAACTCCATTTGCTACCATCAAACAGATTGCAATGAGAAATTAAGGAATGCTTTGTTCTTGGTGGGCGAGATCGGTGGGAACGATTATAACTATGCGTTGTTCCAAGGAAAAACTATTCCAGAGGTGAAAGATATGGTGCCCCAAGTTGTTCAAACCATAAAAAGCGCCGTTGAGAAAGTGATAAGCTACGGAGCTACTCGAGTTGTTGTTCCTGGAAACTTTCCAATCGGATGTTTACCCATCTACCTAACTGGATTCCAAACTAATGATACAACTGCTTACGATGAACTTCATTGTTTGAAAGATTTGAATGGCCTGGCTACTTATCACAATGATCAAATCAAGCAAGCTATTGAAGTGCTCAAGAGAGAGAATCCACACACCATAATCGTATATGGTGACTACTATAATGCATTGTTGTGGATCCTTCGTCGTGCTTTTACACTCGGGTTTGATGAAACTTCTTTGCAAAAATCATGTTGCGGGATTGGAGGAGACTACAACTTCAGCCTCATGAAGATGTGCGGAGTTGGAGTATCAGTTTGTTCAAATCCAGATGAACGCGTTAGTTGGGATGGAATCCATTTAACTCAAAAGGCTTACAAATTCATGGCATATTGGCTCATTCACGACATCTTTCCACAACTTCATTGCATTGTTTGA | 1122 | 41.98 | MAASTKSPSSIVLAVLLVLLSVLGCPSSKAHLLKTCMFDAIYQLGDSISDTGNLIRQNPNTPFSHLPYGETFFNKSTGRCSNGLLMIDYFALDAGLPLVNPYLNKDASTRHGVNFAVAGSTALSSQLLSQNQILSPVTNSSLNQQLYWMFSHFNSICYHQTDCNEKLRNALFLVGEIGGNDYNYALFQGKTIPEVKDMVPQVVQTIKSAVEKVISYGATRVVVPGNFPIGCLPIYLTGFQTNDTTAYDELHCLKDLNGLATYHNDQIKQAIEVLKRENPHTIIVYGDYYNALLWILRRAFTLGFDETSLQKSCCGIGGDYNFSLMKMCGVGVSVCSNPDERVSWDGIHLTQKAYKFMAYWLIHDIFPQLHCIV | 373 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 9068166 | 9069611 | + | CmoCh05G011400.1 | Cmo05g01140 | 383275 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo05g01140 | 373 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - | |
| Cmo05g01140 | 373 | Gene3D | SGNH hydrolase | 28 | 365 | IPR036514 | - | |
| Cmo05g01140 | 373 | PANTHER | ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN | 21 | 371 | - | - | |
| Cmo05g01140 | 373 | PANTHER | ACETYLAJMALAN ESTERASE-LIKE | 21 | 371 | - | - | |
| Cmo05g01140 | 373 | SUPERFAMILY | SGNH hydrolase | 41 | 363 | - | - | |
| Cmo05g01140 | 373 | Pfam | GDSL-like Lipase/Acylhydrolase | 41 | 360 | IPR001087 | GO:0016788 | |
| Cmo05g01140 | 373 | CDD | SGNH_plant_lipase_like | 40 | 358 | IPR035669 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo05g01140 | Cmo12g01030 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo05g01115 | Cmo-Chr5:8887150 | Cmo05g01140 | Cmo-Chr5:9068166 | 0 | dispersed | |
| Cmo05g01117 | Cmo-Chr5:8898950 | Cmo05g01140 | Cmo-Chr5:9068166 | 0 | dispersed | |
| Cmo05g01118 | Cmo-Chr5:8906345 | Cmo05g01140 | Cmo-Chr5:9068166 | 0 | dispersed | |
| Cmo05g01119 | Cmo-Chr5:8913164 | Cmo05g01140 | Cmo-Chr5:9068166 | 0 | dispersed | |
| Cmo05g01120 | Cmo-Chr5:8921311 | Cmo05g01140 | Cmo-Chr5:9068166 | 0 | dispersed | |
| Cmo05g01121 | Cmo-Chr5:8924104 | Cmo05g01140 | Cmo-Chr5:9068166 | 3.23E-150 | dispersed | |
| Cmo05g01140 | Cmo-Chr5:9068166 | Cmo19g01121 | Cmo-Chr19:9510179 | 0 | dispersed | |
| Cmo05g01140 | Cmo-Chr5:9068166 | Cmo07g00196 | Cmo-Chr7:1006614 | 3.80E-76 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo05g01140 | - | - | csv:101217682 | 603.594 |