Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g01189 ATGAAACAAGATTCAAATATGGAAGCTGATTCTGCTCTGCCTGAATCTGAGGAGAAGGAAGTTGGTAGATCTGATGTACAGAAAACTGAGGGAAATGTTGAAGAGCTCTCAACAGAACATGAAGGTAAGAAGAAAGAAGCCGCATCTTCGGCAGTGCAAGAAGATAGCAAAATGAAAGAAGACTTTCCTGCAGAACAAGTAGATGTCATGAAAGAAGCTGTGACTGAAGTTGGGAACACGACTGAAGCTGGGAAGTCTGCTGAAAAGTGCATTGGAGTAGGGTCGCATAAAAAGAAAACTGTAAAACATTTGAAGGTAAAACGAAAAATTATAAAGAAATCCCCAGCTAGCGGTATGTTGAAGAAAAAAAAGGCACAGGCTGAGCAGGAAGACGACAAAAAGGAAAAAGAGGTTCCTGTAGCTCAAGAAGTGGGAGAAACTCTTGAAGCTCAGAATCCCACCGAAAATTCCAGCAAACCAGCGTCAAAGATGAAGAATAATAAAGATTTGAAGGTGAAAAGGAAAATTCTAAAGAAATCTCCAGGCAGCAGTCAACAGACTTGTAAGCTTCAGAGCAGTCCTAAGGTGCAAGTCAGAAAGAAACTGGAGAATAATAAGAGTTTGTTGCAGGTAAATGGGGAAGGTAGTGAAAAAAAGGTCGAAGATATCGAGAAGCCTAACCAAAAGGAAAATATTAATAGAAGTATCTCGAAAGAGGAGCGTATGGAAAAGGGTGAAGAGACTTTTGCTAGGCATAAACGTAATTCTGAGCTTAAAAATAGAATAAAAGAAGGGAAGAATACAGAGAAGGCTGGTTCTTCAGATAAGAGCATAAAAAATCAGAAAAGGAAAGAAAAGGATAGAGCGCAAAAAAGTCGAAGAGATGATAAAAACAAAGAAAATCTTGGTGGATTGATTTTCATGTGCAGTGCAAAAACAAAGCCAGATTGTTTTCACTACAACTTAATGGGTGTTTCTGCTGGCAAACTGGATGTTGTCTTGGCAATCAAACCTGGATTGAAGCTTTTTCTCTATGATTTTGATCTCAAGCTTCTATATGGAATTTATGAAGCATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCATTCCCTGCTCAGGTGCGGTTCAAGGTTTACAAGGACTGTTTTCCACTACCTGAGAACATTTTCAAGAAGGCTATCCAAGAGAATTATTATGAGAAGCACAAGTTCAAAGCTGAACTCTCTGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTCCGACCAGTTGGACTCCACTCGAGTTCTGCTCCTGTTCGGTCTAGGGATAGAAATGTTCATGGGGAAGTTAAAGACATTCGGTTTAGTAACTCTAAGTCCAAGGGTGGCGATACCAGGAAATACCATTTGTCATCTCATGGAAGGGATCGACACCGAGAAGAGGCACCTAGACATAGAGAGGAAGTTCCTCGTGATTTTTACTCAAACGAAAAGGACTATCGAACTTATGATCTCCGGGAAGAGAGAAGAAATTTAGATCCTGTGCCTCGGCCTTCTTTAGAAACATACCACAGAGATCATGATAGGGACTATCAAGTTAGACATCTAGAGCTCAGATACAGGGATGATGTCTCTGCACACGCACAGAGGGAAATAGTTCGCAAGGATCATGTATACTTTAATGGAAAAGATTATCCAGTTTACAGTATTGATTCTAGACCTCAAATATCACCCCCTAGATCAATATCTGCTAGTGGTTCAGAACGCAATGCTTATGATTTGATTTACACTCGTCAATATGGCCTTCCTTCAACCAATCCATATCTGCCTCCTTCAGCCAATCCATATCTGCCTCCTTCAACCGATCCATACCTGCCTCTTTCAACCGATCCATACCTGCTTCCTTCAATGACGGACAAACCAGCCGCCCCTCCAACTTATTCAAGAAGTTATGTTACTGGTATTGAGCCCATGAGACATGCCATTGGTGCTCCATCACATTACAATGAGATGCATCTTGACAATGTGGGAAGTGATATGATGCCGGTTTCATCGCGGTACTCATTTCCAGGTCCATCGTTCTCGTATCGCTAA 2088 41.28 MKQDSNMEADSALPESEEKEVGRSDVQKTEGNVEELSTEHEGKKKEAASSAVQEDSKMKEDFPAEQVDVMKEAVTEVGNTTEAGKSAEKCIGVGSHKKKTVKHLKVKRKIIKKSPASGMLKKKKAQAEQEDDKKEKEVPVAQEVGETLEAQNPTENSSKPASKMKNNKDLKVKRKILKKSPGSSQQTCKLQSSPKVQVRKKLENNKSLLQVNGEGSEKKVEDIEKPNQKENINRSISKEERMEKGEETFARHKRNSELKNRIKEGKNTEKAGSSDKSIKNQKRKEKDRAQKSRRDDKNKENLGGLIFMCSAKTKPDCFHYNLMGVSAGKLDVVLAIKPGLKLFLYDFDLKLLYGIYEASSSGGMKLEPKAFNGAFPAQVRFKVYKDCFPLPENIFKKAIQENYYEKHKFKAELSVKQVRKLSDLFRPVGLHSSSAPVRSRDRNVHGEVKDIRFSNSKSKGGDTRKYHLSSHGRDRHREEAPRHREEVPRDFYSNEKDYRTYDLREERRNLDPVPRPSLETYHRDHDRDYQVRHLELRYRDDVSAHAQREIVRKDHVYFNGKDYPVYSIDSRPQISPPRSISASGSERNAYDLIYTRQYGLPSTNPYLPPSANPYLPPSTDPYLPLSTDPYLLPSMTDKPAAPPTYSRSYVTGIEPMRHAIGAPSHYNEMHLDNVGSDMMPVSSRYSFPGPSFSYR 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9321986 9329265 - CmoCh05G011890.1 Cmo05g01189 383324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g01189 695 MobiDBLite consensus disorder prediction 12 65 - -
Cmo05g01189 695 Coils Coil 279 299 - -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 179 212 - -
Cmo05g01189 695 Pfam Development and cell death domain 303 425 IPR013989 -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 451 493 - -
Cmo05g01189 695 ProSiteProfiles DCD domain profile. 300 427 IPR013989 -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 1 65 - -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 94 297 - -
Cmo05g01189 695 SMART dcd 300 427 IPR013989 -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 123 142 - -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 147 161 - -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 215 297 - -
Cmo05g01189 695 Coils Coil 26 46 - -
Cmo05g01189 695 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 152 690 - -
Cmo05g01189 695 MobiDBLite consensus disorder prediction 96 119 - -
Cmo05g01189 695 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 152 690 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g01189 Cmo12g01110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01189 Cmo-Chr5:9321986 Cmo14g00033 Cmo-Chr14:166273 4.60E-19 dispersed
Cmo06g01711 Cmo-Chr6:11777724 Cmo05g01189 Cmo-Chr5:9321986 2.99E-28 transposed
Cmo12g01110 Cmo-Chr12:10123236 Cmo05g01189 Cmo-Chr5:9321986 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g01189 - - cmos:111450407 1323.53