Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g01191 ATGTTGAGATTCCAAGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGGAACACTGGACATGGCGGTTGGATCTGTGGCCATTCGCCATTCTTTATGTGGCCTGGCTTGCTGTCGTGGTTCCTAGTATAGACTTTGGGGATGCTGTCATTGTTTTAGGTGGACTGGCGGCTCTTCATGTTTTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGTTCAGTACAGTCAGGTTAATGATATTTACCATGCTGATAAATGCAAGATAGTTCCTGCAAAATTTTCAGGCTCGAAAGAAATTGTTCAGCTTCATTTTCGTAAGATTCTGGCAGGTTCTGCATCTGCAGTGGATACTGAGGAGATCTACTTTGATTTCAGAAAACAAAGATTTATTTATTCGAAGGAGAAGGAGACTTTCTGCAAGCTTCCTTACCCAACAAAAGAAACTGTTGGTTATTATCTAAAGAACACCGGCTATGGCTCTGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGACGCAATATATTTGAGTATCCACAGCCTACGTTCGTGAAATTAATGAAAGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGGCTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGGCGTGTTAGAGTGGATACTCAGACCTTAATGGTGCATCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCTGTTGGACGTGATTCTGGTCGGAGTGGTGAAGATAAGTCTGTACCTGCTGATATGCTTATCTTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATATCTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAAAGAGACAAAAGTCATATGTTATTTGGTGGGACCAAAATATTGCAGCATACTCCAGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGAGGACTGGGTTCGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTATTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTATGTTCTTAGTTGTATTTGCCGTTATAGCTGCTGGTTACGTACTTGTAAAGGGATTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTAATTCCTCCTGAACTACCAATGGAACTGTCAATAGCCGTTAATACATCATTAATTGCTCTGGCGCGTCGGGGAATATTTTGTACAGAGCCCTTTCGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACAGGAACATTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGTGTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCACTCAAGGGAGTTGATTGGGCTTACAAATCTGATGAGAAAGCGATTCCCAGAAAGGGAAGTGGGCACGCTGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTACGCCTTCAAGAGGAATTTCTTGCATTTGTGAAGGGTGCCCCCGAAACCATCCAGGAGAGGCTCACGGATATACCTTCATTTTATGTTGAGACGTATAAGAAGTATACACGACAAGGTTCCCGTGTCCTTGCTCTTGCTTACAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGCCCTGGATAGGGACGTGGTGGAGAATGACCTTACATTTGCAGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCGACAATATTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCATGCCACGTAGCTAGCCAAGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAGTATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAGATTTGTCAGAGATGTATGATCTGTGTATTGGAGGTGACTGCATCGAAATGCTACATCGCACCTTCACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATATTGACCACTTTTAAAACAGTAGGAAGAATGACGTTGATGTGTGGGGATGGAACGAACGATGTTGGTGCTTTGAAACAGGCCCATGTAGGAATTGCTCTCCTGAACGCTGTCCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCTAAAGATGACGCTGCTCGGTCTGCAAAGTCGAAGAAATCTAAGCTTTCATCCGAAGCATCAGGAAAACCACTTCTAGCTGGAGAAGGTTCTTCAAAAAGCAAAGGTAGTGCAAAACTGGATTCTGCTACTGAGCAAGCTAGTAACCGTGCACGGACACCTGCCGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCCGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACAGCAAAGCATGCTTCTGTTGCCCCGACTACGGACATTATTCGCCAAGGTCGAAGTACTCTGGTGACAACTCTTCAGATGTTTAAAATACTCGGTCTCAACTGCCTCGCTACCGCCTATGTACTCAGTGTTATGTATTTGGACGGTGTCAAGCTAGGCGATGTTCAAGCGACCATCAGTGGAGTATTCACAGCAGCCTTCTTTCTGTTCATCTCACATGCGCGCCCCCTTCCAACACTTTCAGCTGAACGCCCCCATCCACACATCTTTTGTTCTTATGTTCTCCTTTCTCTGTTAGGCCAATTTGCAATCCACTTATTTTTCTTGATGTCTTCAGTGAAAGAAGCCGAAAAGCACATGCCTGATGAATGTATAGAGCCAGATTCAGACTTTCATCCCAACTTGGTTAACACAGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGCGTATCCGAAAACAAGCCATTCCTATACGCTCTCTTGGCTGCGGTTGGTTTCTTCACCGTCATTACCTCGGATTTGTTCAGAGATCTCAATGACTGGCTGAAACTCGTTCCACTGCCTGCGGGATTGAGGGATAAGCTTCTAGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCCTGGGAAAGACTATTGAGATGGATGTTCCCAGGTAAAATCCCGGCATGGCGAAAGCGACAACGACTGGCGGCTGCGAATCTGGAGAAGAAGAAACAGCTGTGA 3576 44.18 MLRFQVGGKVVERVDLLRKEHWTWRLDLWPFAILYVAWLAVVVPSIDFGDAVIVLGGLAALHVLVLLFTAWSVDFKCFVQYSQVNDIYHADKCKIVPAKFSGSKEIVQLHFRKILAGSASAVDTEEIYFDFRKQRFIYSKEKETFCKLPYPTKETVGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFVKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSVGRDSGRSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSISGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIMFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGVSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWAYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFLAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARALDRDVVENDLTFAGFAVFNCPIRADSATILSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYREKEVGDLSEMYDLCIGGDCIEMLHRTFTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPQSGNSSSEASKDDAARSAKSKKSKLSSEASGKPLLAGEGSSKSKGSAKLDSATEQASNRARTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLFFLMSSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLAWALLMFLCCYSWERLLRWMFPGKIPAWRKRQRLAAANLEKKKQL 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9333496 9351208 - CmoCh05G011910.1 Cmo05g01191 383326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g01191 1191 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Cmo05g01191 1191 SFLD C1.7: P-type atpase like 469 954 - -
Cmo05g01191 1191 Pfam E1-E2 ATPase 256 468 - -
Cmo05g01191 1191 MobiDBLite consensus disorder prediction 878 898 - -
Cmo05g01191 1191 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 42 1148 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Cmo05g01191 1191 Coils Coil 895 915 - -
Cmo05g01191 1191 CDD P-type_ATPase_cation 170 1106 - -
Cmo05g01191 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 780 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo05g01191 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 401 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo05g01191 1191 MobiDBLite consensus disorder prediction 833 902 - -
Cmo05g01191 1191 Gene3D - 483 668 IPR023299 GO:0000166
Cmo05g01191 1191 SUPERFAMILY HAD-like 483 833 IPR036412 -
Cmo05g01191 1191 Gene3D - 224 388 - -
Cmo05g01191 1191 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
Cmo05g01191 1191 SFLD p-type atpase 469 954 IPR044492 -
Cmo05g01191 1191 Gene3D - 669 847 IPR023214 -
Cmo05g01191 1191 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cmo05g01191 1191 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cmo05g01191 1191 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cmo05g01191 1191 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cmo05g01191 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1183 - -
Cmo05g01191 1191 MobiDBLite consensus disorder prediction 846 860 - -
Cmo05g01191 1191 PANTHER CATION-TRANSPORTING ATPASE 1 1183 - -
Cmo05g01191 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cmo05g01191 1191 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cmo05g01191 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Cmo05g01191 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1168 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01191 Cmo-Chr5:9333496 Cmo09g00282 Cmo-Chr9:1251997 1.11E-20 dispersed
Cmo05g01191 Cmo-Chr5:9333496 Cmo12g01110 Cmo-Chr12:10123236 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g01191 K14950 - csv:101215828 2196.39