Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g01253 | ATGATGAAGGATAGTATTCATTCAGCTTTGGCAAGTGATGACATCCTCCTCGAAATCCTCCTCCGTTTGCCCGAGAAATCTGTTTTCAAGTTTATTCTCGTGTCCAAAAGATGGCTGTACTTGATTTGTAATTTTTCTTTTCGTCGTTGTTATGAAAAGCAATGGGGTGCACACAGTCGTCTTTTTGGCTTTTTCGTATGCAATTTTCTTTACATTGACAGGCCACAAGACGGGGTGAGGCGCCCGCGGTACGAGCCTGCTCTACCTCTACTTTCAACTTGTAAAGAGAGTGATGATCTAATGTCATCTGGAATCTTAAGGAAGCTTGGCTATTTTATTGACTACTCTGATGGGCTTCTTCTCTGTGGTCGACACCCGAAACATTATTATGTCTGGGATTCCGTCACCAAGTATCGACGCCAACTTCCTCAACCTCAAAAACACTACAAATATCTATGTACAGCGTTCATGACCGAAGACCCCAGCGAAGGTCGCGGAGATATCGTATATAGAGTTGTTCGGGCAAACTGTGAATGCAGAGTCGATGTAATCAACACCATCTCCATAGAGACTTTCTCCTCACTGACTTGGACATGGAAGCCATCCACTCTTGTTTGTTCTTCAGAGTTTGCTTTGAGCCCATGGACGGTGGGTACCGTGATCAAAGGAGTTATCCACTGGTTCGGAACATATCGAAGTTTAGCCATTTATGATCCCGGATTCGGAGAACGCCGCATAACTTCAATCAAGCTACCAGTCGGTCAGCTGACTCATGACTACGAGGACTCCATTTTAGGAGAGTCATCTGATCGGCTTTTGCAGTACGGTCAAAGCGGGAAGCATGGATTGGAGACATGGGTTCTGTACAAGGAACACGATAACTCGTTATCTCCTTTCGACACTCGTTGCGAGTACCGGTGGAAGTTACGATGCAAACTAAGCTACAAAGAGCTGTGGAAGCAGAACCCGAATTCAGGTATTCGGTCTAAAGAACCTCAAATATTATCGTTCATTCGTCGAAACTCGGACTCTGTTTTCATTAGGTTGGGATCAAACATCTACCAGTGTAACATCAGAAGCAAAACACTTGAAGTGATTCCTTACCATTGTGATGCTCTTTCGATCCCATGGGATTTTTGTAAAGGTACTCCAGTTAACATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGAAGATGCTTGGATTGATGGACAAGTATCCAAGATAACAGGGCAGGAAGCTGAGATCGAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTAGCCAAAATATATCCCAAAGATATGGAGGCTCCAGCTGGTGGTGTCGATGACATGACGAAGCTATCTTACTTGCATGAGCCTGGAGTTCTACAAAATTTAAAAATTCGATATGAACTCAACGAAATCTACACATACACTGGCAATATTCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCACATGATGCATCAATACAAAGGAGCACCATTTGGAGAACTGAGCCCTCATGTGTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATCATTGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAAATGCTCATGCGTTACCTTGCATTTTTAGGTGGCAGGGTGGCCACTGAAGGACGAACAGTTGAGCAACAAGTTCTTGAGTCAAATCCAGTGCTTGAAGCTTTTGGAAATGCAAAAACTGTCAGAAATAACAATTCCAGTCGCTTTGGTAAATTTGTTGAAATCCAGTTTGACAAGCATGGAAGAATCTCAGGAGCAGCTATCCGAACTTACCTCCTCGAGAGATCTCGTGTTTGCCAAGTGTCTGATCCCGAGCGCAATTATCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAATACAAGCTGGGAAACCCCAAGTCATTTCATTATCTTAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATATCGTTGGAATAAGTGCGAGGGAGCAGGAAGCAATCTTTCGAGTTGTTGCTGCAATTCTTCATCTTGGAAACATTGTATTTACCAAGGGAAAAGATGTCGATTCATCAGTTCCAAAAGATGACAACGCTAAGTTTCATCTTAAAATGACTGCAGAGCTTCTCATGTGTGATAATGCTGGCCTCGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTCATAAAACGTAGCTTGGATCCTCAAAGTGCGGCTGTCAGCCGTGATGGTTTGGCCAAAACTATATATTCTCGACTATTTGACTGGCTGGTTGATAAGATTAATGTCTCTATTGGACAAGATCCTAATTCCAAGTCCCTGATTGGAGTCCTTGATATCTACGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAATACACAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTGGATCTCATTGAAAGGAAACCTGGTGGAATTGTGGCTCTCCTTGACGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTTGCAAACAAGCTCTATCAGACTTTCAAAACACATAAGCGGTTTCTAAAGCCAAAACTTTCTCGAACAGATTTTACGATCGCTCATTATGCTGGAGAGGTTTTGTATCAATCTGAACAGTTTTTGGACAAAAACAAGGATTATGTTGTTCCTGAACATCAGGATTTGTTAGGTGCCTCTAAATGTCCATTTGTAGCCGGTCTTTTCCCCCCACTCAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGGTCTCGCTTTAAGCTACAACTACAACAATTAATGGAGACATTAAATTCCACAGAACCTCACTACATCAGATGTGTGAAGCCAAACAACCTCTTAAAACCTGCCATCTTTGAGAATGTCAACATAATGCAACAACTGCGTTGTGGTGGTGTCTTAGAGGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGTCGTGCATTCTTTGAATTCATTAACCGATTCGGAGTTTTAGCTCAAGAATCATTAGAAGGAAACTATGATGAAAAAGCAGTGTGCAAAAAGATATTAGAACAGCAGGGACTTAAAGGCTTTCAGATAGGTAAAACAAAAGTATTCCTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGGTGTTGAGTAATGCCGCAAAGACTATTCAACGACGCACACGAACCCATATTGCTCGTAAACAGTTTATTGCGTTACGAAAGGCAACCATACACGTGCAATCTAGATGGAGAGGGAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGGGAGGCAGCTGCTGTGAAAATTCAGAAACATGCTCGAAGATTTGAAGCGAGAACAGCCTATAAAAGACTACAAAGCTCAGTGCTTGTTGTGCAAACTGGTTTAAGGGCAATGGCAGCTAGGAATGAATTTAGGTTTAGGAAGCAGACAAAGGCAGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAAGCTGCCTCGTACTATACGAAACTTCAGAGAGGCTCAATAGTTGCACAATGTAGATGGAGGGGGAAAATTGCTAGAAAGGAACTTAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTGGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAATTAGAAAAACGCCTAAGGACGGACCTGGAAGAGGCAAAAGCACAGGAGATAGCAAAATTACAAAATTCTTTGCAAGAACTGCAGGCAAAAGCTGACGAAACTAACTCATTGCTTGTTAAGGAGCGAGAGGCTGTGAAGAAGGCTGTTGAAGAAGAACCTGCTGTTATACAAGAAACCCAAGTGCTGGTTGAAGATACTAAGAAAATTGATGATTTGACAGCAGAAGTAGAAAGCTTAAAGACGTCGCTAGAGACGGAGAAAAACAGAGCGGATGAATATGAGAAAAAATATGGTGAAGTAGAACAGTCTAGAGAAGAACAACGTAAAAAGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGCCAACAAGCTGTGTCTATGGCACCTAATAAAATCCTCTCGGGACGGTCTAGATCGATTCTCCAGAGAGGTGCTGAAAGTGGTCATTATGGAGGGGAAGGGAGGACGCCTTTGGATCTACACAGCCCTTCTATTAACCAAAGGGATTCAGAAGTAGAGGATAAACCTCAAAAATCACTTAATGAGAAACAGCAAGAGAATCAAGAATTGCTCATTAGATGTATTGCACAGCACCTTGGCTTTGCAGCAAACAGGCCAATAGCTGCTTGTATCATCTACAAGTGCTTACTTCAGTGGCGGTCATTTGAAGTCGAACGCACCAGCGTATTTGATAGGATAATTCAAACTATAGGCCATGCTATCGAGACTCAGGATAACAACGACGTCTTGGCCTATTGGTTATCCAACGCTTCGACGCTTCTCTTACTGCTTCAGCGTACTTTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAGCGTCGGCGATCGTCGTCAGCTACACTATTTGGGAGGATGACTCAAAGTTTTCGAGGAGCTCCACAAGGAGTCAGTCTATCCTTAATCAATGGTGGAACTAGCGGTGGAGTGGACACTTTAAGGCAGGTTGAAGCAAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTGACAGCTTATGTAGAGAAAATTTATGGAATGATAAGAGATAATCTTAAGAAAGAAATTTCTCCACTGCTAGGATTATGCATCCAGGCACCAAGAACATCAAGAGCAAGTTTGGTGAAGGGATCCTCTCGTTCGGTTGCCACCACGGAGGCGCAGCGTGCCTTAATCGCTCACTGGCAAGGAATCGTGAAGAGCCTCGGGAACTTCCTTAACACCTTGAAAGCAAATCATGTTCCCCCGTTTTTGGTTCGTAAAGTCTTCATACAAATATTTTCTTTCATCAACGTTCAACTATTTAACAGTCTTCTATTACGACGAGAATGTTGTTCGTTTAGCAACGGCGAATATGTCAAAGCTGGGCTGTCTGAGTTAGAGGATTGGTGTTATAAGGCTACTGATGAGTATGCAGGTTCGGCTTGGGACGAGCTAAAGCATATTAGACAAGCGATCGGGTTTCTGGTTATTCATCAAAAGCCGAAAAAGACGCTGGACGAAATAAGTCACGATCTATGTCCTGTACTAAGCATACAGCAGCTGTATCGTATCAGTACGATGTACTGGGACGACAAATACGGCACCCATAGTGTCTCTCCTGATGTTATATCCAATATGAGGGTGTTAATGACGGAAGATTCGAACCATGCAATTAGCAATTCATTTCTATTGGACGACGACTCGAGATTCAAATATGGCGTGCAGTTTGAAGTGAAATGGAGCTCTACTGTGCCTGCAGAATGGCTAAGAAATAGCTCCAAATCAGTTGCGTAG | 5643 | 42.5 | MMKDSIHSALASDDILLEILLRLPEKSVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSRLFGFFVCNFLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLLLCGRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECRVDVINTISIETFSSLTWTWKPSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPGFGERRITSIKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEHDNSLSPFDTRCEYRWKLRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRSKTLEVIPYHCDALSIPWDFCKGTPVNIIVGSHVWIEDPEDAWIDGQVSKITGQEAEIEASNGKKVVAKLAKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMHQYKGAPFGELSPHVFAVADVAYRAMIIEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPKSFHYLNQSNCYELVDVSDAHDYLATRRAMDIVGISAREQEAIFRVVAAILHLGNIVFTKGKDVDSSVPKDDNAKFHLKMTAELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIERKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFLKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGVLAQESLEGNYDEKAVCKKILEQQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIHVQSRWRGKLACKLFKNLKREAAAVKIQKHARRFEARTAYKRLQSSVLVVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKAASYYTKLQRGSIVAQCRWRGKIARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKLQNSLQELQAKADETNSLLVKEREAVKKAVEEEPAVIQETQVLVEDTKKIDDLTAEVESLKTSLETEKNRADEYEKKYGEVEQSREEQRKKLEEKLSNLESENQVLRQQAVSMAPNKILSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRDSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVSLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEDWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSRFKYGVQFEVKWSSTVPAEWLRNSSKSVA | 1880 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9725398 | 9740866 | - | CmoCh05G012530.1 | Cmo05g01253 | 383388 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g01253 | 1880 | SMART | iq_5 | 1210 | 1232 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | iq_5 | 1162 | 1184 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | iq_5 | 1114 | 1136 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | iq_5 | 1137 | 1159 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | iq_5 | 1185 | 1207 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | iq_5 | 1233 | 1255 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | IQ calmodulin-binding motif | 1139 | 1158 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | IQ calmodulin-binding motif | 1165 | 1184 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | IQ calmodulin-binding motif | 1212 | 1231 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | IQ calmodulin-binding motif | 1117 | 1135 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | F-box domain | 12 | 47 | IPR001810 | GO:0005515 | |
Cmo05g01253 | 1880 | Pfam | Myosin N-terminal SH3-like domain | 389 | 430 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | PRINTS | Myosin heavy chain signature | 576 | 603 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | PRINTS | Myosin heavy chain signature | 862 | 890 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | PRINTS | Myosin heavy chain signature | 472 | 491 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | PRINTS | Myosin heavy chain signature | 809 | 837 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | PRINTS | Myosin heavy chain signature | 529 | 554 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | CDD | MyosinXI_CBD | 1473 | 1851 | IPR037975 | GO:0007015 | |
Cmo05g01253 | 1880 | PANTHER | MYOSIN-9 | 385 | 1858 | - | - | |
Cmo05g01253 | 1880 | Pfam | Myosin head (motor domain) | 444 | 1100 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1186 | 1215 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Gene3D | - | 1213 | 1262 | - | - | |
Cmo05g01253 | 1880 | Gene3D | - | 1113 | 1164 | - | - | |
Cmo05g01253 | 1880 | Gene3D | - | 1165 | 1212 | - | - | |
Cmo05g01253 | 1880 | Gene3D | - | 1047 | 1110 | - | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1211 | 1238 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | SUPERFAMILY | F-box domain | 13 | 62 | IPR036047 | GO:0005515 | |
Cmo05g01253 | 1880 | SMART | MYSc_2a | 437 | 1113 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | MobiDBLite | consensus disorder prediction | 1457 | 1473 | - | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1115 | 1142 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Gene3D | - | 632 | 690 | - | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1234 | 1263 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1138 | 1167 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | Coils | Coil | 1257 | 1330 | - | - | |
Cmo05g01253 | 1880 | Gene3D | Kinesin motor domain | 445 | 1042 | IPR036961 | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | IQ motif profile. | 1163 | 1190 | IPR000048 | GO:0005515 | |
Cmo05g01253 | 1880 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 388 | 437 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo05g01253 | 1880 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1165 | 1263 | IPR027417 | - | |
Cmo05g01253 | 1880 | Pfam | DIL domain | 1711 | 1814 | IPR002710 | - | |
Cmo05g01253 | 1880 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 419 | 1165 | IPR027417 | - | |
Cmo05g01253 | 1880 | MobiDBLite | consensus disorder prediction | 1436 | 1474 | - | - | |
Cmo05g01253 | 1880 | PANTHER | MYOSIN | 385 | 1858 | - | - | |
Cmo05g01253 | 1880 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 692 | 981 | - | - | |
Cmo05g01253 | 1880 | CDD | MYSc_Myo11 | 456 | 1100 | IPR036018 | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | Dilute domain profile. | 1522 | 1835 | IPR002710 | - | |
Cmo05g01253 | 1880 | Coils | Coil | 1348 | 1414 | - | - | |
Cmo05g01253 | 1880 | SMART | DIL_2 | 1710 | 1817 | IPR002710 | - | |
Cmo05g01253 | 1880 | Gene3D | - | 819 | 1003 | - | - | |
Cmo05g01253 | 1880 | ProSiteProfiles | Myosin motor domain profile. | 442 | 1112 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g01253 | Cmo-Chr5:9725398 | Cmo10g00772 | Cmo-Chr10:3574855 | 0 | dispersed | |
Cmo12g01163 | Cmo-Chr12:10527493 | Cmo05g01253 | Cmo-Chr5:9725398 | 0 | transposed | |
Cmo12g01162 | Cmo-Chr12:10512698 | Cmo05g01253 | Cmo-Chr5:9725398 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g01253 | K10357 | - | csv:101206606 | 2744.92 |