Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g01254 | ATGGCGAACCGTTGGTGGACTTCCAGCCAGATGGGTCTTCCCGGAGTTGATCATACATCGACGAGCTCCTCCGCCATGAGAATACCAGATCTGGGGATCTCCATGAACGACAACAACGGCGCTGTCAACAGCGGTGGCGGTGATGACGATGACGATAGAGATAACGGTGGCGATGAACCTAAGGAAGGTGCTGTTGAAGTCCCTACGCGCCGCCCCCGTGGCCGCCCGGCTGGCTCCAAGAATAAGCCTAAACCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAACGGAGCTGATATCGCCGAAAGTGTTGCTCACTTCGCTCGTCGGCGACAAAGAGGGGTTTCTGTGCTTAGTGGCAGCGGCACGGTGACGAACGTTACACTCCGGCAACCGTCTGCGCCCGGTGCAGTCTTAACCCTTCAAGGGCGGTTCGAGATTCTCTCGTTGACTGGAACTTTCCTCCCTGGACCAGCCCCACCTGGCTCGACCGGACTCACGATCTACTTAGCCGGTGGCCAAGGGCAGGTGGTGGGCGGTAGCGTTGTCGGGCCACTCACCGCTGCCGGGCCAGTGATGGTGATCGCCGCAACGTTTTCCAACGCTACATACGAAAGGTTACCTCTAGAGGAGGAGGAAGAAGGCGGGGGAGGAGCACAAGGGCATACATCAGCAGGCGGTGGCACCGGCGACGGTTCGCCGCAAGGCATCGGAGGAGGAGTCGGAGATCTGTCAGCTATGCCACCACTCTACAATTTACCACCAAATTTGCTACCAAATGGCGGCGGTGGCGGCGGCGGACAAATGAACCAGGAGGCTTATTCATGGGCTCACGGCGGCCGACCGTCGTTTTAA | 885 | 57.51 | MANRWWTSSQMGLPGVDHTSTSSSAMRIPDLGISMNDNNGAVNSGGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAHFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLQGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGGAQGHTSAGGGTGDGSPQGIGGGVGDLSAMPPLYNLPPNLLPNGGGGGGGQMNQEAYSWAHGGRPSF | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9746104 | 9747560 | + | CmoCh05G012540.1 | Cmo05g01254 | 383389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g01254 | 294 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 95 | 222 | - | - | |
Cmo05g01254 | 294 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Cmo05g01254 | 294 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 7 | 293 | IPR014476 | GO:0003680 | |
Cmo05g01254 | 294 | MobiDBLite | consensus disorder prediction | 219 | 294 | - | - | |
Cmo05g01254 | 294 | Gene3D | - | 98 | 224 | - | - | |
Cmo05g01254 | 294 | ProSiteProfiles | PPC domain profile profile. | 94 | 232 | IPR005175 | - | |
Cmo05g01254 | 294 | PIRSF | ESCAROLA | 11 | 294 | IPR014476 | GO:0003680 | |
Cmo05g01254 | 294 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 | 7 | 293 | - | - | |
Cmo05g01254 | 294 | CDD | DUF296 | 98 | 181 | IPR005175 | - | |
Cmo05g01254 | 294 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Cmo05g01254 | 294 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 211 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g01254 | Cmo-Chr5:9746104 | Cmo06g01345 | Cmo-Chr6:9973532 | 7.51E-93 | dispersed | |
Cmo12g01164 | Cmo-Chr12:10534843 | Cmo05g01254 | Cmo-Chr5:9746104 | 4.91E-135 | wgd | |
Cmo14g01833 | Cmo-Chr14:13926425 | Cmo05g01254 | Cmo-Chr5:9746104 | 3.13E-76 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g01254 | - | - | csv:101220902 | 426.787 |