Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo05g01265 | ATGGAGTTTTTGCAGAGATTCTCTATGGTGAAGTGTACAAATACTATGCCGAAGGAGAGTGGAAGAAAGAAATCCTCATCGGGGAAAACCGTCGCCATTATCCCCACAACGAGGAAGACGAAGTACAGAGTTCAAGCCTGTAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAAGCTGCTCAGGAATCATGGGCAAAGACTCCATTGTGGAGGAGAGCTGAGGTTCTTCACAAAGCTGCTGCGATTTTGAAAGAACACAAAGCCCCCATTGCTGAGTGCTTGGTGAAGGAAATTGCAATGCCGGCCAAAGATCCAGTGACCGAGGTTGTGAGATCTGGAGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATCTTGGGAGAGGGGAAGTTCTTGGTTGCTGATAGTTTCCCTGGAAATTAA | 432 | 45.6 | MEFLQRFSMVKCTNTMPKESGRKKSSSGKTVAIIPTTRKTKYRVQACNQEEVNKVMEIAKAAQESWAKTPLWRRAEVLHKAAAILKEHKAPIAECLVKEIAMPAKDPVTEVVRSGDLVSYCAEEGVRILGEGKFLVADSFPGN | 143 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 9821130 | 9822083 | - | CmoCh05G012650.1 | Cmo05g01265 | 383400 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo05g01265 | 143 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 5 | 140 | IPR016162 | GO:0016491 | |
| Cmo05g01265 | 143 | PANTHER | ALDEHYDE DEHYDROGENASE | 22 | 143 | - | - | |
| Cmo05g01265 | 143 | Pfam | Aldehyde dehydrogenase family | 26 | 131 | IPR015590 | GO:0016491 | |
| Cmo05g01265 | 143 | SUPERFAMILY | ALDH-like | 24 | 134 | IPR016161 | GO:0016491 | |
| Cmo05g01265 | 143 | PANTHER | BNAC02G44970D PROTEIN | 22 | 143 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo05g01265 | Cmo-Chr5:9821130 | Cmo12g01175 | Cmo-Chr12:10631579 | 8.71E-72 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo05g01265 | K00131 | - | csv:101208699 | 220.32 |