Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g01400 ATGAGCAACAACAAGGACAACTTCAACGTCTCGGATCTCGGTTCTGGTATTCAAATTCTTCCTCTTTTTCTTTATCGATGTTCCATTGCTCGTTCTTTTTCACGAATTGATTTCGAGGGGTTTTTGGTTTTTGATTTTGAAGCTCTCAATGAGGAGGATCGAGCAGGCCTCGTCAACGCTCTCAAGAGTAAGATACAGAGCCTCGCTGGGCAGCACTCTGATGCCCTCGAGAACTTATCACCTGTTGTTCGCAAGCGCGTTGAGGCGCTAAGAGAGATACAGGCAAAGGCAAAATTTTTTGAAGAAAGGTTGGCGCTCGAGGCCAAATACCAGAAATTGTATCAGCCACTGTACTCTCAGCGATTCGATATTGTTAATGGTGTTGTTGAAGCTGAAGGAGTTGCCAAAGAATCTGCCGCTGGACAAGAAGAGGATAAAGAAGCAGCAGAAAAAGGAGTACCCGATTTTTGGCTATCTGCAATGAAGAATAATGAAGTATTAGCTGAAGAGATTACTGAACGTGACGAAGGAGCTCTCAAATACTTGAAAGATATCAAGTGGTGTAGAATAGACAATCCCAAAGGGTTCAAGATTGACTTCTTTTTTGACACTAATCCCTTCTTTAAAAATTCTGTCTTGTCTAAGACATATCACATGATTGACGAAGATGAGCCAATTCTTGAGAAAGCAATTGGAACCGAGATTGAATGGTATCCCGGAAAATGCCTGACTCAGAAACTACTTAAGAAGAAGCCGAAGAAGGGATCAAAGAATGCCAAGCCAATCACTAAGACTGAAAACTGTGAAAGTTTTTTCAACTTCTTTAGTCCACCACAAGTGCCCGATGATGATGAAGATATTGATGAGGATACCGCTGAGGAGCTTCAAAATCAGATGGAGCAAGATTATGATATTGGTTGTCAGCTGGGAACAAGAAGGGTGGAAGAGGAGCAGCAGCTGGGGGTGATGGTCAGCAGGGGGAGAGGCCTCCGGAATGCAAGCAGCAGTAGGGGAATGGAATTTGATTGGTCTGGTGAGACTGTCTTGTGTTTTGGGGAGTCCGCTCAATTGGATGTTTCCACTGAGATCTATCAACCTTATCGGAAACAATTTCTCTGCGGTTTATTACGCTTGAGTAGTGAAAATATGATTAACCAAACAACCCTCTCTGGCGGTGGCGGTGGTGGTGGTGGCTGCCCCGACGGCGCTGCAACTGCAAGCGGTGACATCATGGATCAAAGGACTGTTAAGGAAGAGGAGATGGAAGTAAGCACGGAGACGATGGAGGGCGGTGGAGGCGAATCTGGCGGAGGCGATGGGGGTTGGGCGTCATCGGCGACGGCGAAACCAATGGAAGGGTTGCATGAGGTGGGGCCGGCGCCGTTCCTGAAGAAGACGTATGAGATGGTGGAGGATCCGGAAACCGACCCGGTTGTATCTTGGAGCGAAGGCCGTAATAGCTTCATTGTTTGGGATTCTCATAAACTCTCCATCACTCTTCTCCCCAAATACTTCAAGCACTCCAATTTCTCCAGCTTCATCCGCCAGCTCAACACTTATGGTTTTAGAAAGATTGATAGTGATAAATGGGAGTTTGCAAACGAAGGGTTTCAAGGAGGGAAGAAGCATTTACTAAAGAACATAAAAAGAAGAAGCAGGTACAATAATTACAAGAAGCAGCAACAACATTTGGGCTTACAAGATTTGTCAAACCACTCACTTGTTGAAGCAGAACTACAAGCTTTGAAGTCCGACAACAACATTTTGAGAGTAGAGATGTTGAAACTGAGAGACCAGCAGCAGGACTCACACAACCACCTCACCATGGTTGAAGACCGAGTCCGATGCGTCGAGTCCAAGTACCAACAGATGCTCTCTTTCGTCTCTAAAATGTCGAGAGATCCCGGGTTCTGTCGACAGTTGGTGCAGAGGAGAATGCTGAGGAAGAAGCTGATCAACAATGGGGATGAGTTTGGAAACAACAGAAGCTTACTTGCAATGCAAGCCCATCAAAATCTCACCCACTCTGAACTCATCACTACTGAAATGATTCCACAAGCTATCGAACCCGGACCGGTCGTGCTCGAGCCGCCGGTCCGACCCTCCACAATGGTGGTTGATGAAGACAGTGACTCCAAATTCTTTCTGGAATTGGAGGATCTCATCCAGAAGCCTCCTCCTCCTCCTCCTCCTCCTCAGGATTGCCCCTCAGTTCTTTTTCTTTCTTTTGGTTGGCGGATGGAGCCTCGCGTTGGGAATAAGTTTCGCCTTGGCCGGAAGATCGGTAGCGGCTCGTTCGGGGAGATCTATCTTGGTACTAATATACAGACGAATGAAGAGGTTGCAATTAAACTTGAAAATGTCAAGACGAAGCATCCTCAGTTGCTTTACGAGTCTAAGTTATACAGAATTCTTCAAGGAGGAACTGGGATACCTAATGTAAGATGGTTTGGAGTTGAGGGAGACTACAATGTTCTTGTAATGGACTTGCTCGGTCCTAGTCTTGAAGATCTATTTAACTTCTGTAGCAGAAAGCTTTCTTTGAAGACAGTCCTTATGCTTGCAGATCAAATGATCAACCGTGTTGAATTTGTCCATTCTAAATCCTTTCTACATCGGGATATTAAGCCGGACAATTTTCTGATGGGGCTAGGAAGGCGTGCAAATCAGGTTTACATCATTGACTTTGGTCTTGCTAAGAAGTACAGAGATAGTTCTACTCACCAACACATTCCTTACAGAGAAAACAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAACACCCACCTTGGGATAGAGCAAAGTCGAAGGGATGACTTGGAGTCGCTTGGTTATGTCCTTATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGAACCAAGAAGCAGAAGTATGAGAAAATTAGTGAGAAAAAAGTTTCTACCTCTATTGAGGCAAAATTTGCGTCATATTTCCATTACTGCCGATCACTACGTTTTGATGATAAGCCGGATTATGCTTATCTGAAAAGAATATTTCGTGATCTCTTTATTCGTGAAGGTTTCCAGTTTGATTACGTGTTTGACTGGACGATTTTGAAGTACCAGCAGTCGCAGCTGGCCACGCCTCCAACCCGTGCCCCAGGTGCCGTCGCCGGAACCAGTTCTGGAATCCCTCCTGGCATAGCGAATGCAGATAGACAGACAGGTGGAGAGGAGGCTCAACTAGCTGGGATGTCTTTGATGGATTCATCTAGGCGGAGGGCATCCGGGCAGGCTATAAATTCTGGAACTTTTGCCAAACAGAAGAGTCCAATTGCCAATGATATTGCAGTTCCAGCTCCTAAGGATGCCGTGTTCAAGCGTGCCAGTCTTTTCGTCCCTAATTTGAAAGATTCGAGTTCTCTTGCGGTGCAGTTTTCAGGCGCTAATATTGTGGGGCGATCAAGTGGGTCATCAAGACGTGCTGTTGTGTCGAGCAGCCGGGATCCTTACATGGTAAGCGAATCAGATCCACACCGCTCCCGAACGACGGATGCTAGTCCCAGGGCATTGCACAAGAGCATGAGTGCACAGAGAAGACCACCAGTTGGACCAGAGGATCCAAAGAGAAGCGCGTCCGGAAGACACACAGGATATGTAAAGAACTATGACTCTGCTTTGAAGGGAATCGAAGGACTGCAGTTGGAGAATGAGGAGAGGGTACATTATTAA 3711 46.05 MSNNKDNFNVSDLGSGIQILPLFLYRCSIARSFSRIDFEGFLVFDFEALNEEDRAGLVNALKSKIQSLAGQHSDALENLSPVVRKRVEALREIQAKAKFFEERLALEAKYQKLYQPLYSQRFDIVNGVVEAEGVAKESAAGQEEDKEAAEKGVPDFWLSAMKNNEVLAEEITERDEGALKYLKDIKWCRIDNPKGFKIDFFFDTNPFFKNSVLSKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTENCESFFNFFSPPQVPDDDEDIDEDTAEELQNQMEQDYDIGCQLGTRRVEEEQQLGVMVSRGRGLRNASSSRGMEFDWSGETVLCFGESAQLDVSTEIYQPYRKQFLCGLLRLSSENMINQTTLSGGGGGGGGCPDGAATASGDIMDQRTVKEEEMEVSTETMEGGGGESGGGDGGWASSATAKPMEGLHEVGPAPFLKKTYEMVEDPETDPVVSWSEGRNSFIVWDSHKLSITLLPKYFKHSNFSSFIRQLNTYGFRKIDSDKWEFANEGFQGGKKHLLKNIKRRSRYNNYKKQQQHLGLQDLSNHSLVEAELQALKSDNNILRVEMLKLRDQQQDSHNHLTMVEDRVRCVESKYQQMLSFVSKMSRDPGFCRQLVQRRMLRKKLINNGDEFGNNRSLLAMQAHQNLTHSELITTEMIPQAIEPGPVVLEPPVRPSTMVVDEDSDSKFFLELEDLIQKPPPPPPPPQDCPSVLFLSFGWRMEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAKFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPTRAPGAVAGTSSGIPPGIANADRQTGGEEAQLAGMSLMDSSRRRASGQAINSGTFAKQKSPIANDIAVPAPKDAVFKRASLFVPNLKDSSSLAVQFSGANIVGRSSGSSRRAVVSSSRDPYMVSESDPHRSRTTDASPRALHKSMSAQRRPPVGPEDPKRSASGRHTGYVKNYDSALKGIEGLQLENEERVHY 1236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10787694 10799787 + CmoCh05G014000.1 Cmo05g01400 383535

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g01400 1236 MobiDBLite consensus disorder prediction 423 447 - -
Cmo05g01400 1236 Gene3D - 455 552 IPR036388 -
Cmo05g01400 1236 PRINTS Heat shock factor (HSF) domain signature 513 525 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 PRINTS Heat shock factor (HSF) domain signature 462 485 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 PRINTS Heat shock factor (HSF) domain signature 500 512 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 MobiDBLite consensus disorder prediction 1166 1180 - -
Cmo05g01400 1236 SUPERFAMILY Winged helix DNA-binding domain 458 551 IPR036390 -
Cmo05g01400 1236 ProSitePatterns HSF-type DNA-binding domain signature. 501 525 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 MobiDBLite consensus disorder prediction 1145 1165 - -
Cmo05g01400 1236 Gene3D Transferase(Phosphotransferase) domain 1 743 1050 - -
Cmo05g01400 1236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672|GO:0006468
Cmo05g01400 1236 Pfam HSF-type DNA-binding 462 551 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 SMART hsfneu3 458 551 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo05g01400 1236 Coils Coil 579 599 - -
Cmo05g01400 1236 CDD STKc_CK1_delta_epsilon 754 1021 - -
Cmo05g01400 1236 SMART serkin_6 755 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g01400 1236 ProSitePatterns Protein kinases ATP-binding region signature. 761 784 IPR017441 GO:0005524
Cmo05g01400 1236 Gene3D - 77 131 - -
Cmo05g01400 1236 MobiDBLite consensus disorder prediction 1043 1069 - -
Cmo05g01400 1236 PANTHER CASEIN KINASE-RELATED 747 1219 - -
Cmo05g01400 1236 MobiDBLite consensus disorder prediction 1145 1214 - -
Cmo05g01400 1236 SUPERFAMILY Protein kinase-like (PK-like) 751 1029 IPR011009 -
Cmo05g01400 1236 Pfam Protein kinase domain 756 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g01400 1236 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 747 1219 IPR030509 GO:0004672|GO:0005524
Cmo05g01400 1236 SUPERFAMILY NAP-like 62 309 IPR037231 -
Cmo05g01400 1236 Gene3D Nucleosome assembly protein 147 314 - -
Cmo05g01400 1236 ProSiteProfiles Protein kinase domain profile. 755 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo05g01400 1236 Pfam Nucleosome assembly protein (NAP) 86 309 IPR002164 GO:0005634|GO:0006334
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g01400 K02218 CSNK1, CKI; casein kinase 1 [EC:2.7.11.1] - csv:101206138 843.958
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cmo05g01400 Cmo12g00581 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00820 Cmo-Chr1:4383839 Cmo05g01400 Cmo-Chr5:10787694 1.61E-12 dispersed
Cmo05g01400 Cmo-Chr5:10787694 Cmo12g01332 Cmo-Chr12:11591172 0 dispersed
Cmo15g00291 Cmo-Chr15:1363249 Cmo05g01400 Cmo-Chr5:10787694 8.15E-09 dispersed
Cmo17g01181 Cmo-Chr17:9496232 Cmo05g01400 Cmo-Chr5:10787694 8.53E-64 dispersed
Cmo19g00019 Cmo-Chr19:124488 Cmo05g01400 Cmo-Chr5:10787694 1.03E-54 dispersed
Cmo12g01335 Cmo-Chr12:11603018 Cmo05g01400 Cmo-Chr5:10787694 8.88E-149 transposed
Cmo01g00056 Cmo-Chr1:193903 Cmo05g01400 Cmo-Chr5:10787694 0 wgd
Cmo14g01285 Cmo-Chr14:10766102 Cmo05g01400 Cmo-Chr5:10787694 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g164 Blo01g00555 Blo16g00980 Bda01g02007 Bda11g01040 . Bpe02g02194 . . . . Cma05g01399 Cma12g00642 Car05g01314 Car12g00591 . . . . . . . . . . . . . . . . . . . . . . Csa02g00041 Chy05g01447 . . . . . . Bpe13g01250 Bma01g00243 Bma06g00874 Sed03g1798 Cmo05g01400 Cmo12g00581 . . . . Cpe11g01174 . Bhi06g01635 Tan08g0057 Cmetu05g1296 . . . . . . . . . . . Lsi11g00182 . . Cme05g02050
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo17g01181 . 44 232 HSF AT4G17750 59.7 7.9e-61 232.3
Cmo05g00096 . 18 243 HSF AT4G17750 51.4 4.3e-59 226.5
Cmo12g00581 CST 7 240 HSF AT4G17750 50.2 1.4e-57 221.5
Cmo06g01384 CCT,CST 244 444 HSF AT4G17750 52.8 5.7e-51 199.5
Cmo13g00611 CCT,ECH 13 192 HSF AT4G17750 50.3 8.8e-44 175.6
Cmo14g01783 CST 43 171 HSF AT4G17750 61.4 7.4e-43 172.6
Cmo02g00052 . 12 110 HSF AT4G17750 71.7 2.6e-40 164.1
Cmo05g00175 CCT 20 118 HSF AT4G17750 71.7 8.5e-39 159.1
Cmo01g01891 CCT,CST 119 217 HSF AT4G17750 69.7 4.2e-38 156.8
Cmo09g00233 CCT,CST 21 118 HSF AT4G17750 69.4 1.6e-37 154.8
Cmo17g01181 . 45 232 HSF AT5G16820 61.3 1.4e-59 228.0
Cmo19g00019 . 66 288 HSF AT5G16820 51.5 1.8e-57 221.1
Cmo12g00581 CST 41 224 HSF AT5G16820 55.7 1.3e-55 214.9
Cmo05g00096 . 43 227 HSF AT5G16820 55.2 1.4e-54 211.5
Cmo06g01384 CCT,CST 245 449 HSF AT5G16820 50.5 7.4e-48 189.1
Cmo05g01400 CST 461 644 HSF AT5G16820 52.4 1.8e-46 184.5
Cmo07g00157 CCT,ECH 10 192 HSF AT5G16820 52.4 7.7e-45 179.1
Cmo14g01783 CST 24 171 HSF AT5G16820 55.5 2.3e-41 167.5
Cmo02g00052 . 13 112 HSF AT5G16820 78.0 9.7e-40 162.2
Cmo16g01225 CST 24 518 HSF AT1G32330 54.1 6.6e-121 431.8
Cmo06g00645 CST 13 516 HSF AT1G32330 52.3 6.4e-116 415.2
Cmo17g01181 . 33 232 HSF AT1G32330 55.8 1.7e-60 231.1
Cmo12g00581 CST 11 221 HSF AT1G32330 50.2 9.1e-54 208.8
Cmo06g01384 CCT,CST 229 456 HSF AT1G32330 52.3 6.5e-52 202.6
Cmo14g01783 CST 15 171 HSF AT1G32330 53.0 1.1e-43 175.3
Cmo02g00052 . 11 106 HSF AT1G32330 76.0 2.6e-40 164.1
Cmo05g00175 CCT 20 117 HSF AT1G32330 71.4 5.4e-38 156.4
Cmo01g01891 CCT,CST 121 216 HSF AT1G32330 71.9 2.0e-37 154.5
Cmo17g01181 . 45 232 HSF AT3G02990 62.1 1.4e-59 228.0
Cmo05g00096 . 43 243 HSF AT3G02990 52.7 4.2e-56 216.5
Cmo12g00581 CST 41 217 HSF AT3G02990 55.4 5.2e-54 209.5
Cmo14g01783 CST 44 171 HSF AT3G02990 62.7 7.5e-45 179.1
Cmo02g00052 . 13 106 HSF AT3G02990 77.7 9.5e-40 162.2
Cmo17g01181 . 33 228 HSF AT2G26150 61.2 6.3e-65 245.4
Cmo16g01225 CST 3 243 HSF AT2G26150 55.8 1.9e-61 233.8
Cmo06g00645 CST 8 243 HSF AT2G26150 56.1 7.2e-61 231.9
Cmo14g01783 CST 32 168 HSF AT2G26150 66.9 2.3e-51 200.3
Cmo02g00052 . 2 111 HSF AT4G18880 67.3 5.1e-42 169.5
Cmo06g01384 CCT,CST 245 374 HSF AT4G18880 56.0 5.8e-38 156.0
Cmo06g01233 CST 3 467 HSF AT4G13980 51.3 3.6e-116 416.0
Cmo14g01968 CST 6 445 HSF AT4G13980 52.1 3.8e-113 406.0
Cmo02g00052 . 4 111 HSF AT4G13980 65.7 3.0e-38 157.1
Cmo17g01181 . 33 229 HSF AT5G43840 51.8 1.5e-51 200.7
Cmo12g00581 CST 29 220 HSF AT5G43840 52.6 1.7e-47 187.2
Cmo14g01783 CST 32 136 HSF AT5G43840 64.8 5.9e-37 152.1
Cmo19g00019 . 69 384 HSF AT3G22830 51.7 9.0e-87 318.2
Cmo05g00096 . 31 241 HSF AT3G22830 55.9 5.7e-65 245.7
Cmo06g00645 CST 9 242 HSF AT3G22830 56.0 5.3e-63 239.2
Cmo16g01225 CST 13 242 HSF AT3G22830 55.6 1.2e-62 238.0
Cmo14g01783 CST 5 171 HSF AT3G22830 57.1 2.4e-55 213.8
Cmo05g01400 CST 449 651 HSF AT3G22830 50.2 5.9e-54 209.1
Cmo02g00052 . 5 105 HSF AT3G22830 69.3 5.0e-37 152.9
Cmo19g00019 . 69 364 HSF AT3G51910 50.3 3.4e-66 249.2
Cmo05g00096 . 31 248 HSF AT3G51910 51.8 1.1e-53 207.6
Cmo12g00581 CST 29 245 HSF AT3G51910 50.7 2.6e-53 206.5
Cmo14g01783 CST 29 155 HSF AT3G51910 64.6 7.0e-43 171.8
Cmo05g00096 . 20 231 HSF AT3G63350 50.9 7.2e-51 198.4
Cmo12g00581 CST 18 228 HSF AT3G63350 50.9 1.8e-49 193.7
Cmo14g01783 CST 31 135 HSF AT3G63350 69.5 3.1e-38 156.4
Cmo17g01181 . 46 234 HSF AT1G67970 51.1 1.2e-45 181.4
Cmo05g01400 CST 454 648 HSF AT5G54070 51.0 7.2e-50 195.3
Cmo03g00995 CST 2 298 HSF AT4G36990 52.7 1.8e-70 263.5
Cmo16g00141 CCT,CST 15 113 HSF AT4G36990 66.7 6.0e-37 152.1
Cmo16g00141 CCT,CST 15 113 HSF AT5G62020 73.7 2.3e-39 160.2
Cmo05g00175 CCT 17 115 HSF AT5G62020 66.7 3.3e-38 156.4
Cmo02g01513 . 16 333 HSF AT4G11660 50.9 1.4e-78 290.8
Cmo15g01268 CCT 16 347 HSF AT4G11660 52.4 2.6e-72 270.0
Cmo01g01891 CCT,CST 115 218 HSF AT4G11660 74.0 1.0e-44 178.3
Cmo05g00175 CCT 16 121 HSF AT4G11660 71.7 2.3e-44 177.2
Cmo09g00233 CCT,CST 16 119 HSF AT4G11660 73.1 6.7e-44 175.6
Cmo03g00995 CST 2 107 HSF AT4G11660 71.7 2.1e-42 170.6
Cmo16g00141 CCT,CST 14 113 HSF AT4G11660 75.0 3.7e-42 169.9
Cmo07g00722 CST 5 102 HSF AT4G11660 69.4 3.2e-38 156.8
Cmo16g01225 CST 33 126 HSF AT4G11660 69.1 1.8e-36 151.0
Cmo10g00922 CST 16 115 HSF AT4G11660 65.0 3.0e-36 150.2
Cmo03g00056 . 16 215 HSF AT2G41690 54.1 9.6e-52 201.1
Cmo06g00923 . 20 212 HSF AT2G41690 50.7 3.5e-46 182.6
Cmo01g01891 CCT,CST 118 434 HSF AT1G46264 55.2 1.4e-88 323.9
Cmo09g00233 CCT,CST 1 327 HSF AT1G46264 50.7 1.9e-85 313.5
Cmo05g00175 CCT 19 341 HSF AT1G46264 56.6 2.1e-84 310.1
Cmo10g00922 CST 19 197 HSF AT1G46264 51.2 3.1e-51 199.9
Cmo03g00995 CST 4 198 HSF AT1G46264 50.7 3.7e-49 193.0
Cmo16g01225 CST 33 136 HSF AT1G46264 73.1 1.1e-40 164.9
Cmo06g00645 CST 33 138 HSF AT1G46264 71.7 7.1e-40 162.2
Cmo16g00141 CCT,CST 17 119 HSF AT1G46264 67.0 1.2e-39 161.4
Cmo02g00052 . 5 105 HSF AT1G46264 68.3 7.3e-37 152.1
Cmo06g01384 CCT,CST 236 340 HSF AT1G46264 64.8 2.1e-36 150.6
Cmo17g01181 . 36 154 HSF AT1G46264 56.9 2.8e-36 150.2
Cmo11g00611 CCT,CST 11 291 HSF AT3G24520 50.8 7.3e-63 238.4
Cmo05g01345 CCT 54 224 HSF AT3G24520 64.3 1.5e-60 230.7
Cmo17g01181 . 44 232 HSF AT4G17750 59.7 7.9e-61 232.3
Cmo05g00096 . 18 243 HSF AT4G17750 51.4 4.3e-59 226.5
Cmo12g00581 CST 7 240 HSF AT4G17750 50.2 1.4e-57 221.5
Cmo06g01384 CCT,CST 244 444 HSF AT4G17750 52.8 5.7e-51 199.5
Cmo13g00611 CCT,ECH 13 192 HSF AT4G17750 50.3 8.8e-44 175.6
Cmo14g01783 CST 43 171 HSF AT4G17750 61.4 7.4e-43 172.6
Cmo02g00052 . 12 110 HSF AT4G17750 71.7 2.6e-40 164.1
Cmo05g00175 CCT 20 118 HSF AT4G17750 71.7 8.5e-39 159.1
Cmo01g01891 CCT,CST 119 217 HSF AT4G17750 69.7 4.2e-38 156.8
Cmo09g00233 CCT,CST 21 118 HSF AT4G17750 69.4 1.6e-37 154.8
Cmo17g01181 . 45 232 HSF AT5G16820 61.3 1.4e-59 228.0
Cmo19g00019 . 66 288 HSF AT5G16820 51.5 1.8e-57 221.1
Cmo12g00581 CST 41 224 HSF AT5G16820 55.7 1.3e-55 214.9
Cmo05g00096 . 43 227 HSF AT5G16820 55.2 1.4e-54 211.5
Cmo06g01384 CCT,CST 245 449 HSF AT5G16820 50.5 7.4e-48 189.1
Cmo05g01400 CST 461 644 HSF AT5G16820 52.4 1.8e-46 184.5
Cmo07g00157 CCT,ECH 10 192 HSF AT5G16820 52.4 7.7e-45 179.1
Cmo14g01783 CST 24 171 HSF AT5G16820 55.5 2.3e-41 167.5
Cmo02g00052 . 13 112 HSF AT5G16820 78.0 9.7e-40 162.2
Cmo16g01225 CST 24 518 HSF AT1G32330 54.1 6.6e-121 431.8
Cmo06g00645 CST 13 516 HSF AT1G32330 52.3 6.4e-116 415.2
Cmo17g01181 . 33 232 HSF AT1G32330 55.8 1.7e-60 231.1
Cmo12g00581 CST 11 221 HSF AT1G32330 50.2 9.1e-54 208.8
Cmo06g01384 CCT,CST 229 456 HSF AT1G32330 52.3 6.5e-52 202.6
Cmo14g01783 CST 15 171 HSF AT1G32330 53.0 1.1e-43 175.3
Cmo02g00052 . 11 106 HSF AT1G32330 76.0 2.6e-40 164.1
Cmo05g00175 CCT 20 117 HSF AT1G32330 71.4 5.4e-38 156.4
Cmo01g01891 CCT,CST 121 216 HSF AT1G32330 71.9 2.0e-37 154.5
Cmo17g01181 . 45 232 HSF AT3G02990 62.1 1.4e-59 228.0
Cmo05g00096 . 43 243 HSF AT3G02990 52.7 4.2e-56 216.5
Cmo12g00581 CST 41 217 HSF AT3G02990 55.4 5.2e-54 209.5
Cmo14g01783 CST 44 171 HSF AT3G02990 62.7 7.5e-45 179.1
Cmo02g00052 . 13 106 HSF AT3G02990 77.7 9.5e-40 162.2
Cmo17g01181 . 33 228 HSF AT2G26150 61.2 6.3e-65 245.4
Cmo16g01225 CST 3 243 HSF AT2G26150 55.8 1.9e-61 233.8
Cmo06g00645 CST 8 243 HSF AT2G26150 56.1 7.2e-61 231.9
Cmo14g01783 CST 32 168 HSF AT2G26150 66.9 2.3e-51 200.3
Cmo02g00052 . 2 111 HSF AT4G18880 67.3 5.1e-42 169.5
Cmo06g01384 CCT,CST 245 374 HSF AT4G18880 56.0 5.8e-38 156.0
Cmo06g01233 CST 3 467 HSF AT4G13980 51.3 3.6e-116 416.0
Cmo14g01968 CST 6 445 HSF AT4G13980 52.1 3.8e-113 406.0
Cmo02g00052 . 4 111 HSF AT4G13980 65.7 3.0e-38 157.1
Cmo17g01181 . 33 229 HSF AT5G43840 51.8 1.5e-51 200.7
Cmo12g00581 CST 29 220 HSF AT5G43840 52.6 1.7e-47 187.2
Cmo14g01783 CST 32 136 HSF AT5G43840 64.8 5.9e-37 152.1
Cmo19g00019 . 69 384 HSF AT3G22830 51.7 9.0e-87 318.2
Cmo05g00096 . 31 241 HSF AT3G22830 55.9 5.7e-65 245.7
Cmo06g00645 CST 9 242 HSF AT3G22830 56.0 5.3e-63 239.2
Cmo16g01225 CST 13 242 HSF AT3G22830 55.6 1.2e-62 238.0
Cmo14g01783 CST 5 171 HSF AT3G22830 57.1 2.4e-55 213.8
Cmo05g01400 CST 449 651 HSF AT3G22830 50.2 5.9e-54 209.1
Cmo02g00052 . 5 105 HSF AT3G22830 69.3 5.0e-37 152.9
Cmo19g00019 . 69 364 HSF AT3G51910 50.3 3.4e-66 249.2
Cmo05g00096 . 31 248 HSF AT3G51910 51.8 1.1e-53 207.6
Cmo12g00581 CST 29 245 HSF AT3G51910 50.7 2.6e-53 206.5
Cmo14g01783 CST 29 155 HSF AT3G51910 64.6 7.0e-43 171.8
Cmo05g00096 . 20 231 HSF AT3G63350 50.9 7.2e-51 198.4
Cmo12g00581 CST 18 228 HSF AT3G63350 50.9 1.8e-49 193.7
Cmo14g01783 CST 31 135 HSF AT3G63350 69.5 3.1e-38 156.4
Cmo17g01181 . 46 234 HSF AT1G67970 51.1 1.2e-45 181.4
Cmo05g01400 CST 454 648 HSF AT5G54070 51.0 7.2e-50 195.3
Cmo03g00995 CST 2 298 HSF AT4G36990 52.7 1.8e-70 263.5
Cmo16g00141 CCT,CST 15 113 HSF AT4G36990 66.7 6.0e-37 152.1
Cmo16g00141 CCT,CST 15 113 HSF AT5G62020 73.7 2.3e-39 160.2
Cmo05g00175 CCT 17 115 HSF AT5G62020 66.7 3.3e-38 156.4
Cmo02g01513 . 16 333 HSF AT4G11660 50.9 1.4e-78 290.8
Cmo15g01268 CCT 16 347 HSF AT4G11660 52.4 2.6e-72 270.0
Cmo01g01891 CCT,CST 115 218 HSF AT4G11660 74.0 1.0e-44 178.3
Cmo05g00175 CCT 16 121 HSF AT4G11660 71.7 2.3e-44 177.2
Cmo09g00233 CCT,CST 16 119 HSF AT4G11660 73.1 6.7e-44 175.6
Cmo03g00995 CST 2 107 HSF AT4G11660 71.7 2.1e-42 170.6
Cmo16g00141 CCT,CST 14 113 HSF AT4G11660 75.0 3.7e-42 169.9
Cmo07g00722 CST 5 102 HSF AT4G11660 69.4 3.2e-38 156.8
Cmo16g01225 CST 33 126 HSF AT4G11660 69.1 1.8e-36 151.0
Cmo10g00922 CST 16 115 HSF AT4G11660 65.0 3.0e-36 150.2
Cmo03g00056 . 16 215 HSF AT2G41690 54.1 9.6e-52 201.1
Cmo06g00923 . 20 212 HSF AT2G41690 50.7 3.5e-46 182.6
Cmo01g01891 CCT,CST 118 434 HSF AT1G46264 55.2 1.4e-88 323.9
Cmo09g00233 CCT,CST 1 327 HSF AT1G46264 50.7 1.9e-85 313.5
Cmo05g00175 CCT 19 341 HSF AT1G46264 56.6 2.1e-84 310.1
Cmo10g00922 CST 19 197 HSF AT1G46264 51.2 3.1e-51 199.9
Cmo03g00995 CST 4 198 HSF AT1G46264 50.7 3.7e-49 193.0
Cmo16g01225 CST 33 136 HSF AT1G46264 73.1 1.1e-40 164.9
Cmo06g00645 CST 33 138 HSF AT1G46264 71.7 7.1e-40 162.2
Cmo16g00141 CCT,CST 17 119 HSF AT1G46264 67.0 1.2e-39 161.4
Cmo02g00052 . 5 105 HSF AT1G46264 68.3 7.3e-37 152.1
Cmo06g01384 CCT,CST 236 340 HSF AT1G46264 64.8 2.1e-36 150.6
Cmo17g01181 . 36 154 HSF AT1G46264 56.9 2.8e-36 150.2
Cmo11g00611 CCT,CST 11 291 HSF AT3G24520 50.8 7.3e-63 238.4
Cmo05g01345 CCT 54 224 HSF AT3G24520 64.3 1.5e-60 230.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007834 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 2 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9874 PF00069 Pkinase 1.10E-26 CL0016 Cmo TF
74375 PF00069 Pkinase 1.10E-26 CL0016 Cmo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo05g01400 Cmo_Chr05 FPKM 25.877602 29.833929 36.36348 36.36409 32.672775 33.981468 30.488546 46.515453 46.936504 43.62476