Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00018 ATGGGATTCATAGAATGCCTTGGCCGCTTCTTTCAAAATGCAAGGCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTACGCCGGGATGAACATCATCTCCGTCGTCTCCCTCAACCGTGGTATGAGCCATTACGTCCTCGTCGTCTACCGCCACGCCTTTGCCACCGCTGTCATGGCTCCTTTTGCTCTCGTTCTCGAGAGGTACATATCTTTGAGATTCATTCTTGCTTATATAACAATTCTCATTTCTTACTCACCTAGTACTGTACTATTCATGAAAGTAAGACCCAAGATTACATGGAAGATTTTCATTCAGATGTTTGTTCTCGCTCTTCTTGGGCCACTGATCGATCAGAATTTCTACTACGTCGGGCTGAAAATGACATCCCCAACGTACTCGTGTGCCATAAGCAACATGCTTCCTTCGATGACATTCATCATGGCAGTCCTTTGCAGGATGGAGAAGCTGGACTTGAGGAAAGTGAGATGCCAAGCCAAGTTGTTTGGAACAATAGTGACGGTGATGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAACTTCTTCTGGACCGAGCAAGCCCACCACCCGAACTCACCACCGACAGCGGATACGGCTGCGCTCAACCACCACCACGACGGAGAGTTCATCAAAGGCTCAATTTTGCTCATCATAGCCACTCTAGCTTGGGCGGGGTTCTTCATTCTCCAAGTCATAACCTTGAGAAAATACACCGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTCGCTATGGAACACCGCCCCTCCGCCTGGGCCATCGGCTGGGACATGAACCTTCTCGCCGCCGCTTATGCGGGCGTTGTGGCATCTGGGTTGGCGTATTATGTGCAAGGCTTGGTTATGAAGACAAGAGGGCCAGTTTTTGTTACAGCTTTTAGCCCTTTGTTGATGGTGATTGTTGCTTTCATGGGCTCTCTCATCTTGGCTGAGAAGATTTACGTTGGAGGGATAATTGGAGCAGTGGTGATTGTAGTGGGGCTGTACTCAGTTTTGTGGGGGAAGTACAAGGAAGGCAAAGAGAAGGAAGTGGGAGAGGGTGTTGAAGAAGCAGTGAAAGGCGGTGAATTGCCTGTAACAAATGAAGGCATTGTTCAAAAGAACTACGAGGGTTTGGGCATTAGCATGCCTGCACCTGTCATGGTCGAGAAGCTTCAAGCCGCTAACGAAGCATAA 1257 48.77 MGFIECLGRFFQNARPYIAVISLQFGYAGMNIISVVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERYISLRFILAYITILISYSPSTVLFMKVRPKITWKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTYSCAISNMLPSMTFIMAVLCRMEKLDLRKVRCQAKLFGTIVTVMGAMLMTFYKGSVINFFWTEQAHHPNSPPTADTAALNHHHDGEFIKGSILLIIATLAWAGFFILQVITLRKYTAHLSLTTMVCFLGTLQAIVVTLAMEHRPSAWAIGWDMNLLAAAYAGVVASGLAYYVQGLVMKTRGPVFVTAFSPLLMVIVAFMGSLILAEKIYVGGIIGAVVIVVGLYSVLWGKYKEGKEKEVGEGVEEAVKGGELPVTNEGIVQKNYEGLGISMPAPVMVEKLQAANEA 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 122909 124461 + CmoCh06G000180.1 Cmo06g00018 383580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00018 418 PANTHER WAT1-RELATED PROTEIN 89 393 - -
Cmo06g00018 418 PANTHER WAT1-RELATED PROTEIN 89 393 IPR030184 GO:0016021|GO:0022857
Cmo06g00018 418 PANTHER WAT1-RELATED PROTEIN 11 73 IPR030184 GO:0016021|GO:0022857
Cmo06g00018 418 PANTHER WAT1-RELATED PROTEIN 11 73 - -
Cmo06g00018 418 Pfam EamA-like transporter family 221 359 IPR000620 GO:0016020|GO:0016021
Cmo06g00018 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 89 184 - -
Cmo06g00018 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 363 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00018 Cmo14g00505 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01092 Cmo-Chr3:8612856 Cmo06g00018 Cmo-Chr6:122909 2.53E-149 dispersed
Cmo04g01372 Cmo-Chr4:6992590 Cmo06g00018 Cmo-Chr6:122909 9.30E-155 dispersed
Cmo06g00018 Cmo-Chr6:122909 Cmo14g00505 Cmo-Chr14:2499757 0 dispersed
Cmo14g00503 Cmo-Chr14:2492288 Cmo06g00018 Cmo-Chr6:122909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00018 - - bhj:120090189 604.749