Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00036 ATGACTCGTGGGGCTCGATTGCTTGTGTTGGATTTTGTGTTGGCTTTTATGTGGGTATGGTCGGGGACTTTGATTAAGATCTTTGTTTTTGGGACATTGGGATTTGGAAATGATCCGGTCGGTGAGATTGTGAAGGCTTCCTTTTCGATTCTCAACATGTTTGTGTTTGCGTTTTTGTCGAAAATTTGGAATGGGGCTTCTTATAATCCTCTTAACATCTTGTCTGATGCTTTTTCTGGGGATTCCAGTAGCTTTCTCTTCGTTGCTGGTGCCAGAATCCCTGCTCAGGTACTTGGAGCCATTAGTGGTGTTAGGCTGATTATCCAGACAATCCCTGAAGCAGGACGAGGGCCTCATTTGAACGTTGGCATCCATCACGGTGCTCTAACAGAAGGATTGTTAACATACGGCATTGTCCTAATCTCGCTTGGACTGTCCACGACACTCCCAGGAAATTTCTTCATGAAGACATGGATCTCCAGCTGCTCCAAGTTAACTCTTCAGATTCTTGGTTCTGACTTAACCGGTGGCTGCATGAACCCTGCCTCTGTAATAGGATGGGCGTATGCTCGTGGGGAACATATAACCAAAGAACACCTTCTTGTATACTGGATTGCTCCAATTCAAGGAACCATACTTGCAGTGTGGACGTTTAAGTCGGGTAGGTCTCCATGGTGTCCTGTTGTGGCAAGAAAAGTTGACACTCTTACTAATGTATCAGATCGATTCTCCGAGTTGGGTGGATCGTTCACCGGACTCGGTATGGCCACGCCGAACAACCTCTTAAGACTTTACCAAGTTTGGAGGGGAAGTAATAGATTTTTCTGTGGTGGGAGATTGATATTTGGCCCTGACGTATCATCTCTGATTCTCTCCATATGTCTTATTGCTGGTCCTGCAGTTGCTTTCTGCGTAAAGATATATTTGAAGATCCATGATGTTGAACCACCTGGGAACGCTCGTTGGTATCCTGTATTATTTGGAGGTCTCGCCCTCACTTTTCTGGATTTGATATTTCTGTTCGTGACTTCTAGTAGAGATCCTGGAATACTGCCTCGAAATTCAAGGCCTCTTGAGTCAGATGAATTAGATGACATGAATACACCATCCATGGAATGGATCAATGGAAGAACCCCACATCTAAAAATCCCTCGGATTAAAGATGTGACTATAAATGGTCATACAGTAAAAGTCAAGTACTGTGACACTTGTTTATTTTATCGCCCTCCTCGTGCATCTCATTGTTCCATATGCAACAATTGTGTTCAGAGATTTGATCATCACTGCCCATGGGTTGGGCAGTGCATTGGAATACGTAATTATCGGTTCTTCTTCATGTTCATAACGACCTCGACAATCTTGTGTTTATACGTGTTGTCGTTTTCGTTGTCCATCCTTATTCATCATCAAGAAGCCTTTTTCAAGGCTGTGTCCAAAGACATCCTTTCAGATATTCTAGTAGTGTATTGTTTCATTGCCTTTTGGTTCGTTGGTGGCCTTTCCGTATTCCATTCTTATCTTGTACTCACAAATCAGACTACCTATGAGAATTTCCGGTATCGGTATGACAAGAAGGAGAATCCATATAATAAAGGAACGATGAAGAACGTTGGAGAAGTATTTTTCTCGAAAATTCCACCGTCATCACATAAGTTCCGATCCATTGTTGAGGAGGATGACATGATGATGGGCGTTACTCCTTATCTTGAAGAAGGTATTTTTAGCTCGAAGGAGAAACTCGATATGGAAAGGGGTACTAAATATTTGGAGGATGAGACGTTCCCAACTCCTGACATATTGAGGAGATTTGAATACGTGGACAACCTGGAAGATGATCTGAAAATGATGGTAGAAGGAGAAAGACCTCATGTTGATCCACTGTTTCGTCTTGACCGAGAGGCAGAGGAACTTGAAGAAGGTGGCAGTGATGGAATACCTGATCCTCAGCTAGAATTATCAATGGAAGATAGTGATGAAGTAGCCGTAGAAAGTTCCATCCCTGGCGTTAAAAAGGTTCCATTTTCTGGGGAGGCGGAGAAGAGCAACATGCAGCTGTAA 2058 43.2 MTRGARLLVLDFVLAFMWVWSGTLIKIFVFGTLGFGNDPVGEIVKASFSILNMFVFAFLSKIWNGASYNPLNILSDAFSGDSSSFLFVAGARIPAQVLGAISGVRLIIQTIPEAGRGPHLNVGIHHGALTEGLLTYGIVLISLGLSTTLPGNFFMKTWISSCSKLTLQILGSDLTGGCMNPASVIGWAYARGEHITKEHLLVYWIAPIQGTILAVWTFKSGRSPWCPVVARKVDTLTNVSDRFSELGGSFTGLGMATPNNLLRLYQVWRGSNRFFCGGRLIFGPDVSSLILSICLIAGPAVAFCVKIYLKIHDVEPPGNARWYPVLFGGLALTFLDLIFLFVTSSRDPGILPRNSRPLESDELDDMNTPSMEWINGRTPHLKIPRIKDVTINGHTVKVKYCDTCLFYRPPRASHCSICNNCVQRFDHHCPWVGQCIGIRNYRFFFMFITTSTILCLYVLSFSLSILIHHQEAFFKAVSKDILSDILVVYCFIAFWFVGGLSVFHSYLVLTNQTTYENFRYRYDKKENPYNKGTMKNVGEVFFSKIPPSSHKFRSIVEEDDMMMGVTPYLEEGIFSSKEKLDMERGTKYLEDETFPTPDILRRFEYVDNLEDDLKMMVEGERPHVDPLFRLDREAEELEEGGSDGIPDPQLELSMEDSDEVAVESSIPGVKKVPFSGEAEKSNMQL 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 241017 248231 - CmoCh06G000360.1 Cmo06g00036 383598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00036 685 ProSiteProfiles DHHC domain profile. 399 449 - -
Cmo06g00036 685 Gene3D Glycerol uptake facilitator protein. 3 225 IPR023271 -
Cmo06g00036 685 PANTHER S-ACYLTRANSFERASE 263 600 - -
Cmo06g00036 685 SUPERFAMILY Aquaporin-like 6 219 IPR023271 -
Cmo06g00036 685 MobiDBLite consensus disorder prediction 635 685 - -
Cmo06g00036 685 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 263 600 - -
Cmo06g00036 685 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo06g00036 685 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo06g00036 685 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo06g00036 685 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo06g00036 685 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo06g00036 685 Pfam DHHC palmitoyltransferase 398 519 IPR001594 GO:0016409
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00036 Cmo07g01221 CCT
Cmo03g00263 Cmo06g00036 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00213 Cmo-Chr3:3422594 Cmo06g00036 Cmo-Chr6:241017 1.06E-119 dispersed
Cmo03g00263 Cmo-Chr3:3918355 Cmo06g00036 Cmo-Chr6:241017 1.44E-30 dispersed
Cmo06g00036 Cmo-Chr6:241017 Cmo07g01177 Cmo-Chr7:6321121 4.17E-152 dispersed
Cmo19g00523 Cmo-Chr19:6129654 Cmo06g00036 Cmo-Chr6:241017 1.01E-21 dispersed
Cmo14g00488 Cmo-Chr14:2422835 Cmo06g00036 Cmo-Chr6:241017 0 transposed
Cmo14g00487 Cmo-Chr14:2417509 Cmo06g00036 Cmo-Chr6:241017 4.62E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00036 - - cmax:111470165 855.514