Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00047 | ATGGAGATCTTACAGGCTCTTGATGCTCAGGTTCTCGTTGGCTTAGCCGCCGCCGTGGTTGCCATTGTTGCTGGTGCCTTTTTCCTTGTCTCCTCCAGAAAACCAGCATCCACAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAGCTTGTTAAGCGCACGAAGCTGAGCCATAATGTGGCAAAGTTCACTTTTATACTTCCCAAGACCGATTCAATTCTTGGTCTTCCTATTGGACAGCATCTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAGTTACCTTGGACTCTGATGTTGGATATTTTGAGCTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTTCGAGAAATGCGTATGGGGGACTTTCTTGCTGTGAAGGGACCAAAGGGAAGTTTTAAGTATCAACCTGGTCAAGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACACCCATGTATCAAGTTGCTCGGTCTATATTAGAAAACCTGAACGACAAGACACAGATTCACCTTATTTATGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCAAGAGATACCCTGATCGCTTCCAGATCTACTATGTCTTGAACCAGCCTCCTAAAGTTTGGGATGGCGGCGTCGGCTTTGTGTCGAAGGAAATGATTCGAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGTTCCTTCGAAATGTGCTCCTAAACCTGTTAAAAACCGTTTTAGTCATTATAGTTACTTTTGATAAATTCGATAATTTAGGGACCATGATAGGATTTGAACTTCGAAACATTTTGCGGTGTGGACCGCCGCCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATATACACCTGAAATGCAGTTCCAGTTCTAG | 951 | 44.9 | MEILQALDAQVLVGLAAAVVAIVAGAFFLVSSRKPASTACLDPENFKEFKLVKRTKLSHNVAKFTFILPKTDSILGLPIGQHLSCRGKDSQGEEVIKSYTPVTLDSDVGYFELVIKMYPQGRMSHHFREMRMGDFLAVKGPKGSFKYQPGQVRAFGMLAGGSGITPMYQVARSILENLNDKTQIHLIYANVTLEDILLKEELDLLAKRYPDRFQIYYVLNQPPKVWDGGVGFVSKEMIRAHCPAPASDIQFLRNVLLNLLKTVLVIIVTFDKFDNLGTMIGFELRNILRCGPPPMNKAMAAHLDALGYTPEMQFQF | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 299972 | 303874 | + | CmoCh06G000470.1 | Cmo06g00047 | 383609 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00047 | 316 | PRINTS | Cytochrome B5 reductase signature | 97 | 104 | - | - | |
Cmo06g00047 | 316 | PRINTS | Cytochrome B5 reductase signature | 75 | 86 | - | - | |
Cmo06g00047 | 316 | PRINTS | Cytochrome B5 reductase signature | 156 | 175 | - | - | |
Cmo06g00047 | 316 | PRINTS | Cytochrome B5 reductase signature | 194 | 205 | - | - | |
Cmo06g00047 | 316 | PRINTS | Cytochrome B5 reductase signature | 133 | 147 | - | - | |
Cmo06g00047 | 316 | Gene3D | Translation factors | 38 | 137 | - | - | |
Cmo06g00047 | 316 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 286 | 316 | - | - | |
Cmo06g00047 | 316 | Pfam | Oxidoreductase FAD-binding domain | 49 | 147 | IPR008333 | - | |
Cmo06g00047 | 316 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 44 | 148 | IPR017927 | GO:0016491 | |
Cmo06g00047 | 316 | SUPERFAMILY | Riboflavin synthase domain-like | 41 | 149 | IPR017938 | - | |
Cmo06g00047 | 316 | Gene3D | - | 138 | 316 | IPR039261 | - | |
Cmo06g00047 | 316 | CDD | cyt_b5_reduct_like | 49 | 316 | - | - | |
Cmo06g00047 | 316 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 2 | 254 | - | - | |
Cmo06g00047 | 316 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 286 | 316 | IPR001834 | GO:0016491 | |
Cmo06g00047 | 316 | Pfam | Oxidoreductase NAD-binding domain | 157 | 244 | IPR001433 | GO:0016491 | |
Cmo06g00047 | 316 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 134 | 314 | IPR039261 | - | |
Cmo06g00047 | 316 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 2 | 254 | IPR001834 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00203 | Cmo-Chr3:3329411 | Cmo06g00047 | Cmo-Chr6:299972 | 1.81E-156 | dispersed | |
Cmo06g00047 | Cmo-Chr6:299972 | Cmo20g00011 | Cmo-Chr20:114784 | 9.10E-120 | dispersed | |
Cmo06g00047 | Cmo-Chr6:299972 | Cmo07g01169 | Cmo-Chr7:6270399 | 6.24E-167 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00047 | K00326 | - | csv:101212931 | 460.299 |