Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00094 ATGTTTTCGTGGCTGGCAAGGATGGCGTCGGCTTGTTGGAAACCAGTGAGGCGGTATGCCCGTATGAACAAGGATGATGATGAAGATTGTTCGTTAGAGGACTCTTTGTTGTGGAGCAGAGAGCTTGAAAAGCATTCTTATGGGGAGTTTTCTTTTGCTGTGGTTCAAGCGAATGAGGTAATTGAGGATAATAGTCAGGTTGAGGCTGGCCGTGATGCCACTTTTGTCGGCGTTTATGATGGCCATGGTGGCGCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAGGAATTTAATGAGGCTTGCTCAAGAACATGGAACCATAACCGAAGACACCGTCCGGAATGCATTTTCTGCTACGGAGGAAGGGTTTCTTACCCTTGTTCGTCGGTCTTGGGGTATCAAACCGACAATTGCAGCAATGGGATCTTGTTGCCTGGTCGGAGTTATCTGGAGAGGTACATTGTTCATCGGTAACGTTGGCGATTCCCGGGCTGTCATCGGTTCTTTAGGTAAAGCTAATAAGATAGTTGCAGAACAGTTGACAAAGGATCACAATGCAAGTATTGAGGAGGTTCGACAAGAACTCCGGTCCTTGCATCCCGATGACTCACATATCGTCGTTATGAAGCACGGAGTCTGGCGTATAAAAGGCATAATTCAGGTTTCCAGATCGATAGGTGATGCGTATTTGAAAAGGTCGGAATTCTCTCTCGATCCATCCTTTCCACGGTTCCACCTTGCCGAGCCTCTTCGACGACCTGTTCTTACTGCCGAACCATCGTTAAGCACAAGAGTTCTACAACCTCATGACAAGTTTCTCATATTTGCATCTGATGGTCTTTGGGAGCAACTATCGAATCAACAAGCTGTCGAGATTGTGTATAAAAACCCACGAGCGGGAATCGCAAAAAGACTTGTCAAAACAGCATTAACCGAGGCTGCAAGGAAGAGGGAGATGAGATATGATGATCTGAAGAAGCTCGAAAAAGGGATACGACGATTCTTTCACGACGATATCACAGTTGTTGTCATATTTCTGGACAACGAATTGCAAGGGAAGAAGGCACATGTACCAGAATTATCCATTCGTGGGTTCACCGACACGGTTGGACCATCGAATTTCAACGTTCTTCAAGGCATCGATGAGAATGGAAGATCTGTTGGGTGA 1173 46.04 MFSWLARMASACWKPVRRYARMNKDDDEDCSLEDSLLWSRELEKHSYGEFSFAVVQANEVIEDNSQVEAGRDATFVGVYDGHGGADASRFICDHLFRNLMRLAQEHGTITEDTVRNAFSATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLFIGNVGDSRAVIGSLGKANKIVAEQLTKDHNASIEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDAYLKRSEFSLDPSFPRFHLAEPLRRPVLTAEPSLSTRVLQPHDKFLIFASDGLWEQLSNQQAVEIVYKNPRAGIAKRLVKTALTEAARKREMRYDDLKKLEKGIRRFFHDDITVVVIFLDNELQGKKAHVPELSIRGFTDTVGPSNFNVLQGIDENGRSVG 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 549666 552785 + CmoCh06G000940.1 Cmo06g00094 383656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00094 390 Gene3D - 27 358 IPR036457 -
Cmo06g00094 390 SMART PP2C_4 43 346 IPR001932 -
Cmo06g00094 390 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Cmo06g00094 390 CDD PP2Cc 47 348 IPR001932 -
Cmo06g00094 390 PANTHER ALPHABET, ISOFORM E-RELATED 4 373 - -
Cmo06g00094 390 SUPERFAMILY PP2C-like 53 350 IPR036457 -
Cmo06g00094 390 PANTHER PROTEIN PHOSPHATASE 2C 43-RELATED 4 373 - -
Cmo06g00094 390 ProSiteProfiles PPM-type phosphatase domain profile. 49 348 IPR001932 -
Cmo06g00094 390 Pfam Protein phosphatase 2C 68 316 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00094 Cmo14g00420 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00094 Cmo-Chr6:549666 Cmo20g00737 Cmo-Chr20:3678588 1.18E-152 dispersed
Cmo11g01409 Cmo-Chr11:9897645 Cmo06g00094 Cmo-Chr6:549666 1.90E-141 dispersed
Cmo14g00420 Cmo-Chr14:1997601 Cmo06g00094 Cmo-Chr6:549666 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00094 K01102 - csv:101222146 729.169